Return to main results Retrieve Phyre Job Id

Job DescriptionP27829
Confidence97.50%DateThu Jan 5 11:44:05 GMT 2012
Rank292Aligned Residues109
% Identity18%Templated1hyea1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10. ........20....... ..30...... ...40.........50.........60.........70.....
Predicted Secondary structure 

.



..

......















Query SS confidence 






.















. .








. . . . . .






































Query Sequence  TISVIGL. GYIGLPTAAAFASRQK. . QVIGVDINQ. . . . . . HAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVE
Query Conservation 

 



.
 

  

  

  
 .. 
   
   ......  
  
  
     
  
                     
Alig confidence 






.















..








......
















.......














Template Conservation 

 





 

  
   

       
   
             
            .......               
Template Sequence  KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDA. . . . . . . NIYVESDENLRIIDE
Template Known Secondary structure  TTTST
TT


GGGTTS



.......TT
GGGGTT
Template Predicted Secondary structure 






















.......



Template SS confidence 















































































   2.......10.........20.........30.........40.........50......... 60.........70....
 
   76...80.........90.... .....100.........110.........120.
Predicted Secondary structure 










......








Query SS confidence 


















. . . . . .


























Query Sequence  ADAWLIAVPTPFKGDHEPD. . . . . . MTYVESAARSIAPVLKKGALVILESTS
Query Conservation 





 
 

       
......
  
      
   
    


  


Alig confidence 


















......













.











Template Conservation   



  

               

     
       .    







Template Sequence  SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI. CDTKIFVITNPV
Template Known Secondary structure 
S

S



TT

.



SSS
Template Predicted Secondary structure 












.





Template SS confidence 



















































   75....80.........90.........100.........110... ......120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions