 |
Job Description | P27829 | Confidence | 96.05% | Date | Thu Jan 5 11:44:05 GMT 2012 |
Rank | 485 | Aligned Residues | 92 |
% Identity | 9% | Template | c3uw3A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:aspartate-semialdehyde dehydrogenase; |
PDBTitle: crystal structure of an aspartate-semialdehyde dehydrogenase from2 burkholderia thailandensis
|
Resolution | 1.55 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | S | V | I | G | L | . |
G | Y | I | G | L | P | T | A | A | A | F | A | S | R | Q | K | . |
. |
. |
. |
Q | V | I | G | V | D | I | N | Q | H | A | V | D | T | I | N | R | G | E | I | H | I | V | E | P | D | L | A | S | V | V | K | T | A | V | E | G | G | F | L | R | A | S | T | T | P | V | E | A | D | A | W |
Query Conservation |   |
|
|   |
|
|
|
| . |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   | . | . | . | . |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
N | V | G | L | V | G | W | R | G | M | V | G | S | V | L | M | Q | R | M | Q | E | E | G | D | F | D | L | I | E | P | V | F | F | S | T | S | N | A | G | G | K | A | P | S | F | A | K | N | E | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | L | K | D | A | T | S | I | D | D | L | K | K | C | D | V | I |
Template Known Secondary structure |   |
 |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | G | S |  |  |  |  |  |  | S | S |
| T | T | S | B |
|
| T | T |
|
| S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | B |
|  |  | T | T |
|  |  |  |  |  | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | A | V | P | T | P | F | K | G | D | H | E | P | D | M | T | Y | V | E | S | A | A | R | S | I | A | P | V | L | K | K | G | A | L | V | I | L | E | S | T |
Query Conservation |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |
|
|
|
|
|   |
Template Sequence |   |
I | T | C | Q | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | Y | T | N | D | V | F | P | K | L | R | A | . |
A | G | W | N | G | Y | W | I | D | A | A | S |
Template Known Secondary structure |   |
 |  |
| S |
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|
| S |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|