Job Description P27829 Confidence 98.37% Date Thu Jan 5 11:44:05 GMT 2012 Rank 170 Aligned Residues 154 % Identity 26% Template c3tl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of bacillus anthracis str. ames malate dehydrogenase2 in closed conformation. Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.																																								.	.	.
Query SS confidence																													.																																								.	.	.
Query Sequence		M	S	F	A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	.	.	.	L	R	A	S	T	T	P	V	E	A
Query Conservation																													.																																								.	.	.
Alig confidence																													.																			.	.	.	.	.	.																.	.	.
Template Conservation																																																.	.	.	.	.	.
Template Sequence		I	K	R	K	K	V	S	V	I	G	A	G	F	T	G	A	T	T	A	F	L	L	A	Q	K	E	L	A	D	V	V	L	V	D	I	P	Q	L	E	N	P	T	K	G	K	A	.	.	.	.	.	.	L	D	M	L	E	A	S	P	V	Q	G	F	D	A	N	I	I	G	T	S	D	Y	A	D	T	A	D	S
Template Known Secondary structure													S													T	T										G	G	G									.	.	.	.	.	.											T									S		G	G	G	G	T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	.	.	.	.	.	.	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																										.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	V	I	T	A	G	I	A	R	K	P	G	M	S	R	D	D	L	V	A	T	N	S	K	I	M	K	S	I	T	R	D	I	A	K	H	S	P	N	A	I	I	V	V	L	.	.	T	N	P	V	D	A	M	T	Y	S	V	F	K	E	A	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S							S					T	T																										T	T							.	.		S	S																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	R	V	I	G	Q	S	G	V	L	D	T	A	R	F	R	T	F	I	A	Q	E	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G																						T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions