Job Description P27829 Confidence 99.93% Date Thu Jan 5 11:44:05 GMT 2012 Rank 26 Aligned Residues 251 % Identity 14% Template c3qsgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nad-binding phosphogluconate dehydrogenase-like protein; PDBTitle: crystal structure of nad-binding phosphogluconate dehydrogenase-like2 protein from alicyclobacillus acidocaldarius Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	.	.	.	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L
Query Conservation																											.	.	.
Alig confidence																											.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	L	G	F	I	G	F	G	E	A	A	S	A	I	A	S	G	L	R	Q	A	G	A	I	D	X	A	A	Y	D	A	A	S	A	E	S	W	R	P	R	A	E	E	L	G	V	S	C	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	E	V	A	G	E	C	D	V	I	F
Template Known Secondary structure										S														S									S	S												T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Sequence		S	L	V	T	A	.	.	.	.	.	.	.	.	.	.	Q	A	A	L	E	V	A	Q	Q	A	G	P	H	L	C	E	G	A	L	Y	A	D	F	T	S	C	S	P	A	V	K	R	A	I	G	D	V	I	S	R	H	R	P	S	A	Q	Y	.	.	.	.	.	.	.	A	A	V	A	V	X	S	A	V	K	P
Template Known Secondary structure				S		T	.	.	.	.	.	.	.	.	.	.	T	T									G	G	G			T	T																										T	T				.	.	.	.	.	.	.							S		S	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.											70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.								.	.	.	120	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	.	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N
Query Conservation																																														.
Alig confidence									.	.	.	.	.	.	.	.								.	.	.																				.
Template Conservation									.	.	.	.	.	.	.	.								.	.	.
Template Sequence		H	G	H	R	V	P	L	.	.	.	.	.	.	.	.	V	V	D	G	D	G	A	.	.	.	R	R	F	Q	A	A	F	T	L	Y	G	C	R	I	E	V	L	D	G	E	V	G	G	A	A	L	L	K	X	C	R	S	A	V	L	K	G	L	E	A	L	F	L	E	A	L	A	A	A	E	K	X	G	L	A
Template Known Secondary structure		T	G	G	G	S			.	.	.	.	.	.	.	.				S	T	T		.	.	.									T	T	T								S	S	T	T																													T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.								.	.	.
Template SS confidence
		128	.	130	.	.	.	.									.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																								.	.	.
Query SS confidence																		.	.	.	.	.	.																								.	.	.
Query Sequence		V	W	E	L	I	R	L	A	N	R	H	P	R	V	N	I	.	.	.	.	.	.	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	.	.	.	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W
Query Conservation																		.	.	.	.	.	.																								.	.	.
Alig confidence																		.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		D	R	V	L	A	S	L	D	A	S	F	P	E	H	H	L	R	D	L	A	L	Y	L	V	E	R	N	L	E	H	A	D	R	R	A	H	E	L	G	E	V	A	A	T	L	C	S	V	G	V	E	P	L	V	A	E	A	G	Y	R	R	L	T	R	V	A	Q	V
Template Known Secondary structure												S	G	G	G	T																																	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions