Job Description P27829 Confidence 97.80% Date Thu Jan 5 11:44:05 GMT 2012 Rank 259 Aligned Residues 110 % Identity 22% Template c3q2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca Resolution 2.13 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.	.						.
Query SS confidence																							.	.						.
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	.	.	Q	K	Q	V	I	.	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I
Query Conservation																							.	.						.
Alig confidence																							.	.						.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	G	L	V	G	C	G	R	I	S	K	N	H	I	G	A	I	A	Q	H	G	D	R	A	E	L	V	E	I	C	D	T	N	P	E	A	L	Q	A	A	E	A	A	T	G	A	R	P	F	S	S	L	S	D	M	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	N	A	D	A	L	V	L
Template Known Secondary structure									S	T	T									T	T		T	T	T									S	S														B			S	S							.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.														70	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	.	.	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L
Query Conservation																																								.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	P	S	G	L	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	A	I	E	V	A	Q	A	G	R	H	V	V	S	E	K	P	M	A	T	R	W	E	D	G	K	R	M	V	K	A	C	D	E	A	G	V	R	L
Template Known Secondary structure			S		G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.									T	T							S	S	S		S	S															T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions