Job Description P27829 Confidence 99.51% Date Thu Jan 5 11:44:05 GMT 2012 Rank 77 Aligned Residues 243 % Identity 14% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	F	A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L
Query Conservation
Alig confidence					.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	R	.	P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	D	L	E	A	.	.	.	.	.	.	.	.	.	.	.	.	T	L	Q	R	A	A	A	E	D	A	L	I	V
Template Known Secondary structure			S	S	.								S													T	T								S	S										T	T					S					.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure					.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.	.	.	.	.	.	70	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.													.																															.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation							.	.	.	.	.	.	.	.	.	.													.																															.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		L	A	V	P	X	.	.	.	.	.	.	.	.	.	.	T	A	I	D	S	L	L	D	A	V	H	T	.	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	R	N	X	Q	H	R	Y	.	.	.	.	.	.	.	.	.	.	.	V	G	S	H	P	X	A	G	T	A	.
Template Known Secondary structure				S			.	.	.	.	.	.	.	.	.	.													.			T	T								S		S										T	T		G	G	G	B	.	.	.	.	.	.	.	.	.	.	.						T	T				.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.													.																															.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		73	.	.	.	.											.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.													.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	.	.	.	.	.	.	.	.	.	.	.	.	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	W	S	A	S	X	D	G	L	F	K	R	A	V	W	V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S	T	W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S	R	V	G	P	H	D	A	A	A	A	R	V	S	H	L	T	H	I	L	A	E	T	L	A	I	V
Template Known Secondary structure				G	G	G			S	S	S	S	T	T								G	G	G	T	S	S																					T	T																			T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		229	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		L	S	L	I	.	.	.	.	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A	N	R	H	P	R	V	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W	V	I	D	Q	V	K
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	N	G	G	A	L	S	L	S	L	A	A	G	S	Y	R	D	S	T	R	V	A	G	T	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	V	R	A	X	C	E	S	N	A	G	P	L	V	K	A	L	D	E	A	L
Template Known Secondary structure																					T	G	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.																																.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	A	D	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	H	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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