Job Description P27829 Confidence 96.76% Date Thu Jan 5 11:44:05 GMT 2012 Rank 378 Aligned Residues 107 % Identity 14% Template c3ip3D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, putative; PDBTitle: structure of putative oxidoreductase (tm_0425) from2 thermotoga maritima Resolution 2.14 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.																.	.
Query SS confidence																														.	.	.	.																.	.
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	.	.	.	.	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	.	.	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A
Query Conservation																														.	.	.	.																.	.
Alig confidence																														.	.	.	.																.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	C	V	I	G	S	S	G	H	F	R	Y	A	L	E	G	L	D	E	E	C	S	I	T	G	I	A	P	G	V	P	E	E	D	L	S	K	L	E	K	A	I	S	E	X	N	I	K	P	K	K	Y	N	N	W	W	E	X	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	K	P	D	I
Template Known Secondary structure								S	S	S		T					T	T			T	T									S	S	T	T												T	T	T							S								.	.	.	.	.	.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.														.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		W	L	I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	.	.	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R
Query Conservation																																										.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	I	N	T	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	N	G	K	I	L	L	E	A	L	E	R	K	I	H	A	F	V	E	K	P	I	A	T	T	F	E	D	L	E	K	I	R	S	V	Y	Q	K	V	R
Template Known Secondary structure						S	S		.	.	.	.	.	.	.	.	.	.	.	.	.													T	T							S	S	S		S	S															T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions