Job Description P27829 Confidence 96.76% Date Thu Jan 5 11:44:05 GMT 2012 Rank 379 Aligned Residues 116 % Identity 12% Template c3hn7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-l-alanine ligase; PDBTitle: crystal structure of a murein peptide ligase mpl (psyc_0032) from2 psychrobacter arcticus 273-4 at 1.65 a resolution Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.																				.	.
Query SS confidence															.																				.	.
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	.	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	.	.	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L
Query Conservation															.																				.	.
Alig confidence															.																				.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	H	I	H	I	L	G	I	C	G	T	F	X	G	S	L	A	L	L	A	R	A	L	G	H	T	V	T	G	S	D	A	N	I	Y	P	P	X	S	T	Q	L	E	Q	A	G	V	T	I	E	E	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	A	H	L	Q	P	A	P	D	L	V	V
Template Known Secondary structure								T	T	T	S													T	T								S				T	T								T	T						S		.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G		S			S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.												.
Query SS confidence																							.	.	.	.	.	.	.												.
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	.	.	.	.	.	.	.	A	R	S	I	A	P	V	L	K	K	G	.	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M
Query Conservation																							.	.	.	.	.	.	.												.
Alig confidence				.	.	.																	.	.	.	.	.	.	.												.
Template Conservation				.	.	.
Template Sequence		V	G	.	.	.	N	A	X	K	R	G	X	D	V	I	E	Y	X	L	D	T	G	L	R	Y	T	S	G	P	Q	F	L	S	E	Q	V	L	Q	S	R	H	V	I	A	V	A	G	T	H	G	K	T	T	T	T	T	X	L	A	W	I	L	H	Y
Template Known Secondary structure				.	.	.	T	T			T	T	S										T														T	G	G	G	S								S	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		67	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions