Job Description P27829 Confidence 100.00% Date Thu Jan 5 11:44:05 GMT 2012 Rank 5 Aligned Residues 399 % Identity 29% Template c3gg2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sugar dehydrogenase, udp-glucose/gdp-mannose PDBTitle: crystal structure of udp-glucose 6-dehydrogenase from2 porphyromonas gingivalis bound to product udp-glucuronate Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	.	.	.	.	E	A	D	A	W	L
Query Conservation																																																																								.	.	.	.
Alig confidence																																																																								.	.	.	.
Template Conservation
Template Sequence		D	I	A	V	V	G	I	G	Y	V	G	L	V	S	A	T	C	F	A	E	L	G	A	N	V	R	C	I	D	T	D	R	N	K	I	E	Q	L	N	S	G	T	I	P	I	Y	E	P	G	L	E	K	M	I	A	R	N	V	K	A	G	R	L	R	F	G	T	E	I	E	Q	A	V	P	E	A	D	I	I	F
Template Known Secondary structure									S													T	T								S										T	T			S	S			T	T											T	T	S					S						G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R
Query Conservation
Alig confidence																																																														.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.
Template Sequence		I	A	V	G	T	P	A	G	E	D	G	S	A	D	M	S	Y	V	L	D	A	A	R	S	I	G	R	A	M	S	R	Y	I	L	I	V	T	K	S	T	V	P	V	G	S	Y	R	L	I	R	K	A	I	Q	E	E	L	D	K	R	.	.	.	.	.	.	E	V	L	I	D	F	D	I	A	S	N	P	E	F
Template Known Secondary structure								B		T	T	S	S	B																		S								S				T	T																T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	.	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N
Query Conservation																							.
Alig confidence																							.																	.	.
Template Conservation																																								.	.
Template Sequence		L	K	E	G	N	A	I	D	D	F	M	K	P	D	R	V	V	V	G	V	D	S	D	R	A	R	E	L	I	T	S	L	Y	K	P	M	L	R	.	.	V	L	F	M	D	I	A	S	A	E	M	T	K	Y	A	A	N	A	M	L	A	T	R	I	S	F	M	N	D	V	A	N	L	C	E	R	V	G	A	D
Template Known Secondary structure				T	T	S							S		S							S	S												T	T	T			.	.																																						T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																	.	.																							.	.	.
Query SS confidence																	.	.																							.	.	.
Query Sequence		V	W	E	L	I	R	L	A	N	R	H	P	R	V	N	.	.	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	.	.	.	Q	N	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W	V	I	D	Q	V	K	A	A	V	A	D	C	L	A	A	T
Query Conservation																	.	.																							.	.	.
Alig confidence																	.	.																							.	.	.																																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		V	S	M	V	R	L	G	I	G	S	D	S	R	I	G	S	K	F	L	Y	P	G	C	G	Y	G	G	S	C	F	P	K	D	V	K	A	L	I	R	T	A	E	D	N	G	Y	R	M	E	V	L	E	A	V	E	R	V	N	E	K	Q	K	S	I	L	F	D	K	F	S	T	Y	Y	.	.	.	.	.	.	.
Template Known Secondary structure											T	S	T	T	T		S	S	S				S	S				S	S	S															T	T																	T	T										T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		D	K	R	A	S	E	L	K	I	A	C	F	G	L	A	F	K	P	N	I	D	D	L	R	E	S	P	A	M	E	I	A	E	L	I	A	Q	W	H	S	G	E	T	L	V	V	E	P	N	I	H	Q	L	P	K	K	L	T	G	.	.	L	C	T	L	A	Q	L	D	E	A	L	A	T	A	D	V	L	V	M
Query Conservation																																																													.	.
Alig confidence																																							.																						.	.
Template Conservation																																							.
Template Sequence		K	G	N	V	Q	G	R	C	V	A	I	W	G	L	S	F	K	P	G	T	D	D	M	R	E	A	P	S	L	V	L	I	E	K	L	L	E	.	V	G	C	R	V	R	V	Y	D	P	V	A	M	K	E	A	Q	K	R	L	G	D	K	V	E	Y	T	T	D	M	Y	D	A	V	R	G	A	E	A	L	F	H
Template Known Secondary structure		T	T			T	T									S	S	S	T	T					T	T													.	T	T								T	T	T									G	G	G	S				S	S						T	T		S
Template Predicted Secondary structure																																							.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.					.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		L	V	D	H	S	Q	F	K	V	I	N	G	D	N	.	.	.	.	V	H	Q	Q	Y	V	V	D	A	K	G	V	W
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.
Template Conservation
Template Sequence		V	T	E	W	K	E	F	R	M	P	D	W	S	A	L	S	Q	A	M	A	A	S	L	V	I	D	G	R	N	V	Y
Template Known Secondary structure			S			G	G	G	S	S								T	T	S	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.