Job Description P27829 Confidence 99.95% Date Thu Jan 5 11:44:05 GMT 2012 Rank 21 Aligned Residues 253 % Identity 18% Template c3g0oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A	V	P
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	G	I	V	G	L	G	S	X	G	X	G	A	A	R	S	C	L	R	A	G	L	S	T	W	G	A	D	L	N	P	Q	A	C	A	N	L	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	C	G	A	A	A	S	A	R	E	F	A	G	V	V	D	A	L	V	I	L	V	V
Template Known Secondary structure									S													T	T								S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S				S	S	S	T	T	T	T	T	T		S							S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	.	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P
Query Conservation																				.
Alig confidence				.	.	.	.	.	.	.	.	.								.																																							.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		N	A	.	.	.	.	.	.	.	.	.	A	Q	V	R	Q	V	L	F	D	G	V	A	H	L	X	K	P	G	S	A	V	X	V	S	S	T	I	S	S	A	D	A	Q	E	I	A	A	A	L	T	A	L	N	L	N	X	.	.	.	.	.	.	.	.	.	L	D	A	P	V	S	G	G	A	V	K	A	A	Q
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.												G	G	G	S		T	T							S																T	T	T				.	.	.	.	.	.	.	.	.							S							T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	.	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V	W	E
Query Conservation																																											.
Alig confidence						.	.	.	.	.	.	.	.																														.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		G	E	X	T	.	.	.	.	.	.	.	.	V	X	A	S	G	S	E	A	A	F	T	R	L	K	P	V	L	D	A	V	A	S	N	V	Y	R	I	S	D	T	P	G	A	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	A	A	E	A	X	A	L	A	A	R	A	G	I	P	L	D	V
Template Known Secondary structure		T				.	.	.	.	.	.	.	.																													S	S	T	T																														T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		137	.	.	140									.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.												.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		L	I	R	L	A	N	R	H	P	R	V	N	.	.	.	.	.	.	.	.	.	.	.	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	.	.	.	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W
Query Conservation														.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		X	Y	D	V	V	T	H	A	A	G	N	S	W	X	F	E	N	R	X	Q	H	V	V	D	G	D	Y	T	P	R	S	A	V	D	I	F	V	K	D	L	G	L	V	A	D	T	A	K	A	L	R	F	P	L	P	L	A	S	T	A	L	N	X	F	T	S	A	S	N	A
Template Known Secondary structure							T	T	S	T	T														T	T					S	S	B																		T	T																			T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions