Job Description P27829 Confidence 99.60% Date Thu Jan 5 11:44:05 GMT 2012 Rank 66 Aligned Residues 194 % Identity 12% Template c3dzbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus Resolution 2.46 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I
Query Conservation																										.	.
Alig confidence																										.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	Y	I	A	G	L	G	L	I	G	G	S	L	A	L	G	I	K	R	D	H	P	D	Y	E	I	L	G	Y	N	R	S	D	Y	S	R	N	I	A	L	E	R	G	I	V	D	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	D	F	K	E	F	A	P	L	A	D	V	I	I	L
Template Known Secondary structure							S			S												T	T		T	T	S							S											T		S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						G	G	G		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.															.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	.	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R
Query Conservation																													.
Alig confidence						.	.	.	.	.	.	.	.	.	.														.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	P	I	.	.	.	.	.	.	.	.	.	.	K	Q	T	X	A	Y	L	K	E	L	A	D	L	D	L	K	D	N	V	I	I	T	D	A	G	S	T	K	R	E	I	V	E	A	A	E	R	Y	L	T	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	Q	F	V	G	S	H	P	X
Template Known Secondary structure			S			.	.	.	.	.	.	.	.	.	.											T	T	S				T	T								S														T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.											.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.															.	.	.	.	120	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	.	.	.	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		A	G	S	A	A	D	V	T	L	F	E	N	A	Y	Y	I	F	T	P	T	S	L	T	K	E	T	T	I	P	E	L	K	D	I	L	S	G	L	K	S	R	Y	V	E	I	D	A	A	E	H	D	R	V	T	S	Q	I	S	H	F	P	H	L	L	A	S	G	L	X	E	Q	A	A	D	Y	A	Q	A
Template Known Secondary structure		B						T	T	T	T	T	T	S								T	T			T	T									G	G	G	G																				T
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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