Job Description P27829 Confidence 96.30% Date Thu Jan 5 11:44:05 GMT 2012 Rank 444 Aligned Residues 117 % Identity 20% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																								.																									.	.
Query SS confidence																								.																									.	.
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	.	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	.	.	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L
Query Conservation																								.																									.	.
Alig confidence																								.																									.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		A	Q	V	L	I	L	G	X	G	R	I	G	T	G	A	Y	D	E	L	R	A	R	Y	G	K	I	S	L	G	I	E	I	R	E	E	A	A	Q	Q	H	R	S	E	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	.	.	.	.	.	.	.	.	.	T	G	H	V	K	L	V	L
Template Known Secondary structure			S							S																S							S											T	T								T	T							T	B		S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Sequence		L	A	X	P	H	H	.	.	.	.	.	.	.	.	.	Q	G	N	Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	I	A	E	Y	.	.	.	.	.	.	P	D	Q	L	E	G	L	L	E	S	G	V	D	A	A	F	N	I
Template Known Secondary structure					S	S		.	.	.	.	.	.	.	.	.													T	T			S							S	S	.	.	.	.	.	.											T		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions