Job Description P27829 Confidence 99.39% Date Thu Jan 5 11:44:05 GMT 2012 Rank 90 Aligned Residues 211 % Identity 15% Template c3c24A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution Resolution 1.62 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	S	F	A	T	I	S	V	I	G	L	G	Y	I	.	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W
Query Conservation																.
Alig confidence																.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	P	K	T	V	A	I	L	G	A	G	G	K	X	G	A	R	I	T	R	K	I	H	D	S	A	H	H	L	A	A	I	E	I	A	P	E	G	R	D	R	L	Q	G	X	G	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	G	D	G	W	I	D	E	A	D	V	V
Template Known Secondary structure											T	T	T	S													S	S	S								S										T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	G	G	G	G	T		S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																		.	.	60	.	.	.	.	.	.	.	.	.	70
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.
Query SS confidence																																																																									.	.	.	.
Query Sequence		L	I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	.	.	.	.	D	V	N	I	A
Query Conservation																																																																									.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	L	P	D	.	.	.	.	.	.	.	.	.	.	N	I	I	E	K	V	A	E	D	I	V	P	R	V	R	P	G	T	I	V	L	I	L	D	A	.	.	.	.	.	.	.	.	.	A	A	P	Y	A	G	V	X	P	E	R	A	D	I	T	Y	F	I	G	H	P	C	H	P	P	L	F	N	D	E
Template Known Secondary structure					S			.	.	.	.	.	.	.	.	.	.											G	G	G	S		T	T						S		S	.	.	.	.	.	.	.	.	.						T		S				T	T	S										S		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.											.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	.	.	.	.	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L
Query Conservation																																																										.	.	.	.
Alig confidence																																																										.	.	.	.
Template Conservation
Template Sequence		T	D	P	A	A	R	T	D	Y	H	G	G	I	A	K	Q	A	I	V	C	A	L	X	Q	G	P	E	E	H	Y	A	I	G	A	D	I	C	E	T	X	W	S	P	V	T	R	T	H	R	V	T	T	E	Q	L	A	I	L	E	P	G	L	S	E	X	V	A	X	P	F	V	E	T	X	V	H	A	V	D	E
Template Known Secondary structure			S					T		S	S	S	S	S	S											S		T														T		S																T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	D	R	Y	G	I	D	R	Q	A	A	L	D	F	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions