Job Description P27829 Confidence 96.43% Date Thu Jan 5 11:44:05 GMT 2012 Rank 421 Aligned Residues 177 % Identity 17% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	.	.	.	.	.	.	.	.	.	.	.	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E	F	G	G	V	R	G	Y	.	.	.	.	.	.	.	.	.	P	K	A	E	P	L	P	A	A	D	F
Template Known Secondary structure										S													T	T									S	S						T	T														T	S	S	S	T	T		.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.										280	.	.	.	.	.	.	.	.	.	290
		73	.		.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure				.										.
Query SS confidence				.										.
Query Sequence		P	V	.	E	A	D	A	W	L	I	A	V	.	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A
Query Conservation				.										.
Alig confidence				.										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	G	L	P	V	E	F	L	V	P	A	A	L	E	K	Q	I	T	E	Q	N	A	W	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R	I	V	A	E	G	A	N	G	P	T	.	.	T	P	A	A	D	D	I	L	L	E	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T				S						S	S	S	S		B		T	T	T	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S						S	S	S		B	.	.												T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.																.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S
Query Conservation
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	V	L	V	V	P	D	V	I	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	T	V	S	Y	F	E	W	V	Q	D	F	N	S	Y	F	W	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	N	A	R	L	E	R	V	L	R	N	A	F	E	A	V	W
Template Known Secondary structure		.	.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					341	.	.	.	.	.	.	.	.	350	.														.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.														.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	A	Q	E	K	K	I	P	L	R	T	A	A	Y	V	V	A
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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