Job Description P27829 Confidence 96.82% Date Thu Jan 5 11:44:05 GMT 2012 Rank 371 Aligned Residues 115 % Identity 17% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80
Predicted Secondary structure										.																																																																	.	.
Query SS confidence										.																																																																	.	.
Query Sequence		A	T	I	S	V	I	G	L	.	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	.	.	A	D	A	W	L
Query Conservation										.																																																																	.	.
Alig confidence										.																		.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																												.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	C	G	T	K	.	I	V	G	G	V	T	P	G	K	G	G	Q	.	N	V	H	G	V	P	V	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	K	E	A	V	K	E	T	D	A	N	A	S	V
Template Known Secondary structure								T	T	T	S													T	T			.							T	T		T	T		.			T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																												.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60																	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.													.
Template Conservation							.	.	.	.	.	.	.	.	.	.													.
Template Sequence		I	F	V	P	A	.	.	.	.	.	.	.	.	.	.	P	F	A	K	D	A	V	F	E	A	I	D	.	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I	G	P	N	T	P	G
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.													.	T	T		S							S																		T						S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		76	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions