Job Description P27829 Confidence 100.00% Date Thu Jan 5 11:44:05 GMT 2012 Rank 2 Aligned Residues 402 % Identity 25% Template c2q3eH_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.	.																																								.	.	.
Query SS confidence																												.	.																																								.	.	.
Query Sequence		M	S	F	A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	.	.	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	.	.	.	F	L	R	A	S	T	T	P	V	E
Query Conservation																												.	.																																								.	.	.
Alig confidence																												.	.																																								.	.	.
Template Conservation
Template Sequence		F	E	I	K	K	I	C	C	I	G	A	G	Y	V	G	G	P	T	C	S	V	I	A	H	M	C	P	E	I	R	V	T	V	V	D	V	N	E	S	R	I	N	A	W	N	S	P	T	L	P	I	Y	E	P	G	L	K	E	V	V	E	S	C	R	G	K	N	L	F	F	S	T	N	I	D	D	A	I	K	E
Template Known Secondary structure													S	T	T													T	T	S							S									T	S	S	S		S	S			T	T									B	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		A	D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	.	.	.	.	.	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	D	L	V	F	I	S	V	N	T	P	T	K	T	Y	G	M	G	K	G	R	A	A	D	L	K	Y	I	E	A	C	A	R	R	I	V	Q	N	S	N	G	Y	K	I	V	T	E	K	S	T	V	P	V	R	A	A	E	S	I	R	R	I	F	D	A	N	T	.	.	.	.	.	.	.	.	.	K	P	N	L
Template Known Secondary structure			S										B		S	S	S	T	T	T	T	T	S	B																		S								S				T	T											T	T		.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.										.	150	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.															.
Query SS confidence																																		.	.	.	.	.															.
Query Sequence		D	V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	.	.	.	.	.	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	.	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A
Query Conservation																																		.	.	.	.	.															.
Alig confidence																																		.	.	.	.	.															.
Template Conservation
Template Sequence		N	L	Q	V	L	S	N	P	E	F	L	A	E	G	T	A	I	K	D	L	K	N	P	D	R	V	L	I	G	G	D	E	T	P	E	G	Q	R	A	V	Q	A	L	C	A	V	Y	E	H	W	V	P	R	E	K	I	L	T	T	N	T	W	S	S	E	L	S	K	L	A	A	N	A	F	L	A	Q	R	I	S
Template Known Secondary structure														T	T	S							S		S								S	S															T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.																													.	.	.	.	.
Query SS confidence																															.	.																													.	.	.	.	.
Query Sequence		F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A	N	R	H	P	R	V	.	.	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	Q	.	.	.	.	.	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F
Query Conservation																															.	.																													.	.	.	.	.
Alig confidence																															.	.																													.	.	.	.	.
Template Conservation
Template Sequence		S	I	N	S	I	S	A	L	C	E	A	T	G	A	D	V	E	E	V	A	T	A	I	G	M	D	Q	R	I	G	N	K	F	L	K	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	N	L	V	Y	L	C	E	A	L	N	L	P	E	V	A	R	Y	W	Q	Q	V	I	D	M	N	D	Y	Q	R	R
Template Known Secondary structure														T												T	S	T	T	T		S	S	S					S				S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		W	V	I	D	Q	V	K	A	A	V	A	D	C	L	A	A	T	D	K	R	A	S	E	L	K	I	A	C	F	G	L	A	F	K	P	N	I	D	D	L	R	E	S	P	A	M	E	I	A	E	L	I	A	Q	W	H	S	G	E	T	L	V	V	E	P	N	I	H	Q	L	P	K	K	L	T	G	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																						.																						.	.	.	.
Template Conservation												.	.	.	.	.	.	.																																						.
Template Sequence		R	F	A	S	R	I	I	D	S	L	.	.	.	.	.	.	.	F	N	T	V	T	D	K	K	I	A	I	L	G	F	A	F	K	K	D	T	G	D	T	R	E	S	S	S	I	Y	I	S	K	Y	L	M	D	.	E	G	A	H	L	H	I	Y	D	P	K	V	P	R	E	Q	I	V	V	D	L	S	H	D	Q
Template Known Secondary structure											T	.	.	.	.	.	.	.	T	T			T	T									S	S	S	S	S					T	T													.	T	T								S	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.																																						.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
						374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.						.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																			.	.	.	.	.
Query SS confidence		.	.	.	.																																			.	.	.	.	.
Query Sequence		.	.	.	.	L	C	T	L	A	Q	L	D	E	A	L	A	T	A	D	V	L	V	M	L	V	D	H	S	Q	F	K	V	I	N	G	D	N	V	.	.	.	.	.	H	Q	Q	Y	V	V	D	A	K	G	V	W
Query Conservation		.	.	.	.																																			.	.	.	.	.
Alig confidence		.	.	.	.																																			.	.	.	.	.
Template Conservation
Template Sequence		V	S	R	L	V	T	I	S	K	D	P	Y	E	A	C	D	G	A	H	A	V	V	I	C	T	E	W	D	M	F	K	E	L	D	Y	E	R	I	H	K	K	M	L	K	P	A	F	I	F	D	G	R	R	V	L
Template Known Secondary structure										S	S						T	T		S						S			G	G	G	G	G	S									S		S	S						S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.