Job Description P27829 Confidence 97.81% Date Thu Jan 5 11:44:05 GMT 2012 Rank 257 Aligned Residues 149 % Identity 18% Template c2pwzG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of the apo form of e.coli malate dehydrogenase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure								.																.	.	.																	.	.	.
Query SS confidence								.																.	.	.																	.	.	.
Query Sequence		T	I	S	V	I	G	.	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	.	.	.	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	.	.	.	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D
Query Conservation								.																.	.	.																	.	.	.
Alig confidence								.																.	.	.																	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	V	L	G	A	A	G	G	I	G	Q	A	L	A	L	L	L	K	T	Q	L	P	S	G	S	E	L	S	L	Y	D	I	A	P	V	T	P	G	V	A	V	D	L	S	H	I	P	T	A	V	K	I	.	.	.	.	.	.	.	.	.	.	K	G	F	S	G	E	D	A	T	P	A	L	E	G	A	D
Template Known Secondary structure							T	T	T	S														S		T	T								S	S	T	T										T	S		S	S				.	.	.	.	.	.	.	.	.	.					S	S							T	T		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.											.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	.	.	.	.	.	.	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																									.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	L	I	S	A	G	V	A	R	K	P	G	M	D	R	S	D	L	F	N	V	N	A	G	I	V	K	N	L	V	Q	Q	V	A	K	T	C	P	K	A	C	I	G	I	.	.	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S																										T	T	S					.	.		S	S																	T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	N	K	L	F	G	V	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S																					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions