Job Description P27829 Confidence 99.75% Date Thu Jan 5 11:44:05 GMT 2012 Rank 46 Aligned Residues 233 % Identity 17% Template c2pv7B_ PDB info PDB header:isomerase, oxidoreductase Chain: B: PDB Molecule:t-protein [includes: chorismate mutase (ec 5.4.99.5) (cm) PDBTitle: crystal structure of chorismate mutase / prephenate dehydrogenase2 (tyra) (1574749) from haemophilus influenzae rd at 2.00 a resolution Resolution 2.00 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		S	F	A	T	I	S	V	I	.	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L
Query Conservation										.
Alig confidence										.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	H	K	I	V	I	V	G	G	Y	G	K	L	G	G	L	F	A	R	Y	L	R	A	S	G	Y	P	I	S	I	L	D	R	E	D	W	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	S	I	L	A	N	A	D	V	V	I
Template Known Secondary structure		T								T	T	T	S													T	T								T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G						T	T		S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																														.	.	.	140	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	V	P	I	.	.	.	.	.	.	.	.	.	.	N	L	T	L	E	T	I	E	R	L	K	P	Y	L	T	E	N	X	L	L	A	D	L	T	S	V	K	R	E	P	L	A	K	X	L	E	V	H	T	G	A	V	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	H	P	X	F	G	A	D	I
Template Known Secondary structure						G	.	.	.	.	.	.	.	.	.	.	G	G									G	G	G			T	T	S							S														S	S						.	.	.	.	.	.	.	.	.	.	.	.			S	S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.											.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.													200	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V
Query Conservation
Alig confidence							.	.	.	.	.	.																																																											.	.	.	.
Template Conservation							.	.	.	.	.	.																																																											.	.	.	.
Template Sequence		A	S	X	A	K	.	.	.	.	.	.	Q	V	V	V	R	C	D	G	R	F	P	E	R	Y	E	W	L	L	E	Q	I	Q	I	W	G	A	K	I	Y	Q	T	N	A	T	E	H	D	H	N	X	T	Y	I	Q	A	L	R	H	F	S	T	F	A	N	G	L	H	L	.	.	.	.	S	K	Q	P	I	N	L
Template Known Secondary structure		S			T	T	.	.	.	.	.	.											G	G	G	T										T	T																			T															.	.	.	.		T	S	S
Template Predicted Secondary structure							.	.	.	.	.	.																																																											.	.	.	.
Template SS confidence
		208	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	L	I	R	L	A	N	R	H	P	R	V	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W	V	I	D	Q	V	K	A	A	V	A	D	C	L	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Sequence		A	N	L	L	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	I	Y	R	L	E	L	A	X	I	G	R	L	F	A	Q	D	A	E	L	Y	A	D	I	I	X	D	K	.	S	E	N	L	A	V	I	E	T	L	K	Q	T	Y	D	E	A	L	T
Template Known Secondary structure							T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	G	S										T	T		.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template SS confidence
		278	.	280	.	.	.	.																	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions