Job Description P27829 Confidence 100.00% Date Thu Jan 5 11:44:05 GMT 2012 Rank 6 Aligned Residues 399 % Identity 28% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.
Predicted Secondary structure																												.	.																																									.	.	.
Query SS confidence																												.	.																																									.	.	.
Query Sequence		S	F	A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	.	.	.	R	A	S	T	T	P	V	E	A
Query Conservation																												.	.																																									.	.	.
Alig confidence																												.	.																																									.	.	.
Template Conservation
Template Sequence		K	V	S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E	A
Template Known Secondary structure				S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	.	.	.	.	.	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	K	L	K
Template Known Secondary structure		S										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.												.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.															.
Query SS confidence																																	.	.	.	.	.															.
Query Sequence		V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	.	.	.	.	.	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	.	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F
Query Conservation																																	.	.	.	.	.															.
Alig confidence																																	.	.	.	.	.															.
Template Conservation
Template Sequence		F	Q	V	L	S	N	P	E	F	L	A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S
Template Known Secondary structure													T	T								S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																													.	.	.	.	.
Query SS confidence																														.	.																													.	.	.	.	.
Query Sequence		A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A	N	R	H	P	R	V	.	.	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	Q	.	.	.	.	.	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W
Query Conservation																														.	.																													.	.	.	.	.
Alig confidence																														.	.																													.	.	.	.	.
Template Conservation
Template Sequence		I	N	S	I	S	A	V	C	E	A	T	G	A	E	I	S	E	V	A	H	A	V	G	Y	D	T	R	I	G	S	K	F	L	Q	A	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	S	L	V	Y	L	C	E	S	L	N	L	P	Q	V	A	D	Y	W	Q	G	V	I	N	I	N	N	W	Q	R	R	R
Template Known Secondary structure													T												T	S	T	T	T		S	T	T					S				S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		V	I	D	Q	V	K	A	A	V	A	D	C	L	A	A	T	D	K	R	A	S	E	L	K	I	A	C	F	G	L	A	F	K	P	N	I	D	D	L	R	E	S	P	A	M	E	I	A	E	L	I	A	Q	W	H	S	G	E	T	L	V	V	E	P	N	I	H	Q	L	P	K	K	L	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																																						.																				.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																																						.
Template Sequence		F	A	D	K	I	I	A	E	L	.	.	.	.	.	.	.	F	N	T	V	T	D	K	K	I	A	I	F	G	F	A	F	K	K	N	T	G	D	T	R	E	S	S	A	I	H	V	I	K	H	L	M	E	.	E	H	A	K	L	S	V	Y	D	P	K	V	Q	K	S	Q	M	L	N	D	L	A	S	V	T	S
Template Known Secondary structure										T	.	.	.	.	.	.	.	T	T			T	T									S	S	S	S	S					T	T												T	.	T	T								S	S	S													S
Template Predicted Secondary structure											.	.	.	.	.	.	.																																						.
Template SS confidence
		321	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
							372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.						.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																					.	.	.	.	.
Query SS confidence		.	.	.	.	.																																					.	.	.	.	.
Query Sequence		.	.	.	.	.	T	G	L	C	T	L	A	Q	L	D	E	A	L	A	T	A	D	V	L	V	M	L	V	D	H	S	Q	F	K	V	I	N	G	D	N	V	.	.	.	.	.	H	Q	Q	Y	V	V	D	A	K	G	V	W
Query Conservation		.	.	.	.	.																																					.	.	.	.	.
Alig confidence		.	.	.	.	.																																					.	.	.	.	.
Template Conservation
Template Sequence		A	Q	D	V	E	R	L	I	T	V	E	S	D	P	Y	A	A	A	R	G	A	H	A	I	V	V	L	T	E	W	D	E	F	V	E	L	N	Y	S	Q	I	H	N	D	M	Q	H	P	A	A	I	F	D	G	R	L	I	L
Template Known Secondary structure													S							T	T		S						S			G	G	G	T	T	S								T	S		S	S						S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450