Job Description P27829 Confidence 96.98% Date Thu Jan 5 11:44:05 GMT 2012 Rank 354 Aligned Residues 118 % Identity 14% Template c2nvwB_ PDB info PDB header:transcription Chain: B: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal sctucture of transcriptional regulator gal80p from2 kluyveromymes lactis Resolution 2.10 Å

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		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.												.	.	.	.										.	.								.																.						.	.
Query SS confidence						.	.												.	.	.	.										.	.								.																.						.	.
Query Sequence		M	S	F	A	.	.	T	I	S	V	I	G	L	G	Y	I	G	.	.	.	.	L	P	T	A	A	A	F	A	S	.	.	R	Q	K	Q	V	I	G	.	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	.	I	H	I	V	E	.	.	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R
Query Conservation						.	.												.	.	.	.										.	.								.																.						.	.
Alig confidence						.	.												.	.	.	.										.	.								.																.						.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		A	S	S	R	P	I	R	V	G	F	V	G	L	T	S	G	K	S	W	V	A	K	T	H	F	L	A	I	Q	Q	L	S	S	Q	F	Q	I	V	A	L	Y	N	P	T	L	K	S	S	L	Q	T	I	E	Q	L	Q	L	K	H	A	T	G	F	D	S	L	E	S	F	A	Q	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					S								S			S	T	T	S					T								T	T	T	T									S	S											T	T		T	T					S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		A	S	T	T	P	V	E	A	D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	.	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R
Query Conservation																																																					.
Alig confidence		.	.	.	.																		.	.	.	.	.	.																									.
Template Conservation		.	.	.	.																		.	.	.	.	.	.
Template Sequence		.	.	.	.	Y	K	D	I	D	M	I	V	V	S	V	K	V	P	E	H	Y	.	.	.	.	.	.	E	V	V	K	N	I	L	E	H	S	S	Q	N	L	N	L	R	Y	L	Y	V	E	W	A	L	A	A	S	V	Q	Q	A	E	E	L	Y	S	I	S	Q	Q	R	A
Template Known Secondary structure		.	.	.	.		T	T		S						S							.	.	.	.	.	.									T	T	T	T		S	S								S	S	S	S	S	S													T		T
Template Predicted Secondary structure		.	.	.	.																		.	.	.	.	.	.
Template SS confidence
						84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions