Job Description P27829 Confidence 98.36% Date Thu Jan 5 11:44:05 GMT 2012 Rank 172 Aligned Residues 156 % Identity 16% Template c2nacA_ PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A	V
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	V	G	T	V	A	A	G	R	I	G	L	A	V	L	R	R	L	A	P	F	D	V	H	L	H	Y	T	D	R	H	R	L	P	E	S	V	E	K	E	L	N	L	T	W	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	E	D	M	Y	P	V	C	D	V	V	T	L	N	C
Template Known Secondary structure										S											G	G	G	T								S	S											T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					G	G	G		S						S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.																	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	H	P	E	T	E	H	M	I	N	.	.	.	.	.	.	.	.	D	E	T	L	K	L	F	K	R	G	A	Y	I	V	N	T	A	R	G	K	L	C	D	R	D	A	V	A	R	A	L	E	S	G	R	L	.	.	.	.	.	.	.	.	.	.	A	G	Y	A	G	D	V	W	F	P	Q	P	A	P	K
Template Known Secondary structure					T	T	T	T	T		B	S	.	.	.	.	.	.	.	.					T	T	S		T	T							S		G	G	G	B											T	T	S		.	.	.	.	.	.	.	.	.	.						S			S	S	S	S			T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.									.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		G	Q	V	M	V	E	L	I	K	N	D	R	V	.	.	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		D	H	P	W	R	T	M	P	Y	N	G	M	T	P	H	I	S	G	T	T	L	T	A	Q	A	R	Y	A	A	G	T	R
Template Known Secondary structure		T		G	G	G	T	S	T	T	B					S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions