Job Description P27829 Confidence 98.42% Date Thu Jan 5 11:44:05 GMT 2012 Rank 158 Aligned Residues 151 % Identity 20% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		4	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																	.	.															.	.
Query SS confidence										.																	.	.															.	.
Query Sequence		A	T	I	S	V	I	G	L	.	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	.	.	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A
Query Conservation										.																	.	.															.	.
Alig confidence										.																	.	.															.	.									.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.
Template Sequence		A	K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	T	P	G	V	A	A	D	L	S	H	I	E	T	K	A	.	.	.	.	.	.	.	.	.	A	V	K	G	Y	L	G	P	E	Q	L	P	D	C	L	K	G	C	D	V
Template Known Secondary structure								T	T	T	S	T	T												T	T									S	S	S									T	T	S	S	S	S		.	.	.	.	.	.	.	.	.							S	G	G	G						T	T		S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.
Query Sequence		W	L	I	A	V	P	T	P	F	K	G	D	H	E	P	.	.	.	.	.	.	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V
Query Conservation																	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	.	.	A	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S					T	T			G	G	G	G																				T	T	S						.	.	S	S																T	T			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	N	K	I	F	G	V	T	T	L	D	I	V	R	A	N	T	F	V	A	E	L	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S																					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions