Job Description P27829 Confidence 100.00% Date Thu Jan 5 11:44:05 GMT 2012 Rank 12 Aligned Residues 250 % Identity 20% Template c2cvzD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: structure of hydroxyisobutyrate dehydrogenase from thermus2 thermophilus hb8 Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A	V
Query Conservation
Alig confidence																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	V	A	F	I	G	L	G	A	X	G	Y	P	X	A	G	H	L	A	R	R	F	P	.	T	L	V	W	N	R	T	F	E	K	A	L	R	H	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	G	S	E	A	V	P	L	E	R	V	A	E	A	R	V	I	F	T	C	L
Template Known Secondary structure										S	T	T												S		.						S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									G	G	G	G	G	G	S	S
Template Predicted Secondary structure																										.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template Sequence		P	T	T	.	.	.	.	.	.	.	.	.	R	E	V	Y	E	V	A	E	A	L	Y	P	Y	L	R	E	G	T	Y	W	V	D	A	T	S	G	E	P	E	A	S	R	R	L	A	E	R	L	R	E	K	G	V	T	Y	L	D	A	P	V	S	G	G	.	.	.	.	.	.	.	.	.	T	S	G	A	E	A
Template Known Secondary structure		S	S		.	.	.	.	.	.	.	.	.											T	T	T			T	T							S																T	T	T										S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V	W	E	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																		.
Template Conservation						.	.	.	.	.	.	.	.																		.
Template Sequence		G	T	L	T	.	.	.	.	.	.	.	.	V	X	L	G	G	P	E	E	A	V	E	R	V	R	P	F	L	.	A	Y	A	K	K	V	V	H	V	G	P	V	G	A	G	H	A	V	K	A	I	N	N	A	L	L	A	V	N	L	W	A	A	G	E	G	L	L	A	L	V	K	Q	G	V	S	A	E	K	A
Template Known Secondary structure		T				.	.	.	.	.	.	.	.					S									G	G	G		.	T	T									S	T	T																														T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																		.
Template SS confidence
		126	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.											.	.	.	.	.	.	.	.															.	.	.
Query SS confidence													.	.	.	.											.	.	.	.	.	.	.	.															.	.	.
Query Sequence		I	R	L	A	N	R	H	P	R	V	N	.	.	.	.	I	L	Q	P	G	P	G	V	G	G	.	.	.	.	.	.	.	.	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	.	.	.	P	Q	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W
Query Conservation													.	.	.	.											.	.	.	.	.	.	.	.															.	.	.
Alig confidence													.	.	.	.											.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		L	E	V	I	N	A	S	S	G	R	S	N	A	T	E	N	L	I	P	Q	R	V	L	T	R	A	F	P	K	T	F	A	L	G	L	L	V	K	D	L	G	I	A	X	G	V	L	D	G	E	K	A	P	S	P	L	L	R	L	A	R	E	V	Y	E	X	A	K	R	E
Template Known Secondary structure						T	T	S	T	T								T					T	T	T	S					S	S	B																T	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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