Job Description P27829 Confidence 98.34% Date Thu Jan 5 11:44:05 GMT 2012 Rank 173 Aligned Residues 155 % Identity 22% Template c1wziA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.		.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.								.																	.	.	.	.	.	.	.	.	.
Query SS confidence						.								.																	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	F	A	.	T	I	S	V	I	G	L	.	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	.	.	.	.	.	.	.	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A
Query Conservation						.								.																	.	.	.	.	.	.	.	.	.
Alig confidence						.								.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.
Template Sequence		M	K	A	P	V	R	V	A	V	T	G	A	A	G	Q	I	G	Y	S	L	L	F	R	I	A	A	G	E	M	L	G	K	D	Q	P	V	I	L	Q	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	V	M	E	L	E	D	C	A	F	P	L	.	.	.	.	.	.	L	A	G	L	E	A	T	D	D	P
Template Known Secondary structure											S	S	T	T	S												T	T	T	T	T		T	T											T	T	T													T	T	T		T	T	.	.	.	.	.	.								S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		S	T	T	P	V	E	A	D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	.	.	.	.	.	.	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																													.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	F	K	D	A	D	Y	A	L	L	V	G	A	A	P	R	K	A	G	M	E	R	R	D	L	L	Q	V	N	G	K	I	F	T	E	Q	G	R	A	L	A	E	V	A	K	K	D	V	K	V	L	V	V	G	N	.	P	A	N	T	N	A	L	I	A	Y	K	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	T		S												S	S																									S		T	T							S	S	.	S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	P	G	L	N	P	R	N	F	T	A	M	T	R	L	D	H	N	R	A	K	A	Q	L	A	K	K	T	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T	S		G	G	G																					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions