Job Description P27829 Confidence 99.76% Date Thu Jan 5 11:44:05 GMT 2012 Rank 45 Aligned Residues 279 % Identity 14% Template c1txgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	.	.	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A
Query Conservation																														.	.
Alig confidence																														.	.																									.	.	.
Template Conservation																																																								.	.	.
Template Sequence		I	V	S	I	L	G	A	G	A	M	G	S	A	L	S	V	P	L	V	D	N	G	N	E	V	R	I	W	G	T	E	F	D	T	E	I	L	K	S	I	S	A	G	R	E	H	P	R	L	G	V	K	L	N	.	.	.	G	V	E	I	F	W	P	E	Q	L	E	K	C	L	E	N	A	E	V	V	L	L	G
Template Known Secondary structure							S																									G	G	G									T	T			B	T	T	T	T	B				.	.	.	S						G	G	G						T	T		S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Sequence		V	S	T	.	.	.	.	.	.	.	.	.	.	D	G	V	L	P	V	M	S	R	I	L	P	Y	L	K	D	Q	Y	I	V	L	I	S	K	G	L	I	D	F	D	N	S	V	L	T	V	P	E	A	V	W	R	L	K	H	.	.	.	.	.	.	D	L	R	E	R	T	V	A	I	T	G	P	A	I	A	R
Template Known Secondary structure		S		G	.	.	.	.	.	.	.	.	.	.	G	G									T	T	T			S									S					T	T											T	T	S	T	.	.	.	.	.	.	T		G	G	G						S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template SS confidence
		79	80	.											.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																							.	.	.	.	.	220
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	S	F	R	D
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		E	V	A	K	R	M	P	T	T	V	.	.	.	V	F	S	S	P	S	E	S	S	A	N	K	M	K	E	I	F	E	T	E	Y	F	G	V	E	V	T	T	D	I	I	G	T	E	I	T	S	A	L	K	N	V	Y	S	I	A	I	A	W	I	R	G	Y	E	S	R	K	N	V	E	M	S	N	A	K	G	V
Template Known Secondary structure					T	T						.	.	.					S														B	T	T							S																														T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.									.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Query Sequence		V	N	I	A	F	A	N	E	L	S	L	I	C	A	D	Q	G	I	N	V	W	E	.	.	.	.	.	.	L	I	R	L	A	N	R	H	P	R	V	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	Q	A	.	.	.	.	.	.	.	.	R	L	I	R
Query Conservation																								.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	T	R	A	I	N	E	M	A	E	L	I	E	I	L	G	G	D	R	E	T	A	F	G	L	S	G	F	G	D	L	I	A	T	F	R	G	G	R	N	G	M	L	G	E	L	L	G	K	G	L	S	I	D	E	A	M	E	E	L	E	R	R	G	V	G	V	V	E	G	Y	K	T	A	E	K	A	Y	R
Template Known Secondary structure																		T	S		G	G	G	G	G	S	T	T	T							T	T	T													T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	E	V	N	D	H	K	P	F	W	V	I	D	Q	V	K	A	A	V
Query Conservation
Alig confidence												.	.
Template Conservation												.	.
Template Sequence		L	S	S	K	I	N	A	D	T	K	.	.	L	L	D	S	I	Y	R	V	L
Template Known Secondary structure						T	T					.	.
Template Predicted Secondary structure												.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions