Job Description P27829 Confidence 96.75% Date Thu Jan 5 11:44:05 GMT 2012 Rank 380 Aligned Residues 102 % Identity 15% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		S	F	A	T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	.	T	P	V	E	A	D	A	W	L
Query Conservation																																																																								.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	Q	N	I	V	L	A	N	R	T	F	S	K	T	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	A	E	R	F	Q	P	Y	G	N	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I
Template Known Secondary structure		T	T								S	S	T	T	T	T	T	T							T	T								S	S								.	.	.	.	.	.	.	.	.	.	.	.					G	G	G	S							G	G	G				S		B	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.													.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	T	S	A	A	S	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	I	L	K	L	G	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	B	S					S				S	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.																	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions