Job Description P27829 Confidence 99.61% Date Thu Jan 5 11:44:05 GMT 2012 Rank 64 Aligned Residues 247 % Identity 15% Template c1ks9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; PDBTitle: ketopantoate reductase from escherichia coli Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A	V	P
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	V	L	G	C	G	A	L	G	Q	L	W	L	T	A	L	C	K	Q	G	H	E	V	Q	G	W	L	R	V	P	Q	P	Y	C	S	V	N	L	V	E	T	D	G	S	I	F	N	.	.	.	.	.	.	.	.	.	E	S	L	T	A	N	D	P	D	F	L	A	T	S	D	L	L	L	V	T	L	K
Template Known Secondary structure									S													T	T								S	S			S									T	T	S					.	.	.	.	.	.	.	.	.						S							T		S						S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50										.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	F	K	G	D	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	.	.	.	.	.	.	.	.	.	W	Q	V	S	D	A	V	K	S	L	A	S	T	L	P	V	T	T	P	I	L	L	I	H	N	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	I	E	E	L	Q	N	I	Q	Q	P	L	L	M	G	T	T	T	H	A	A	R	R	D	G	N
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.	.	G	G										T	T	S		T	T	S							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	G	G	G	T	T			S															T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73											.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	M	V	E	L	I	K	N	D	R	V	.	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	I	H	V	A	N	G	I	T	H	I	G	P	A	R	Q	Q	D	G	D	Y	S	Y	L	A	D	I	L	Q	T	V	L	P	D	V	A	W	H	N	N	I	R	A	E	L	W	R	K	L	A	V	N	C	V	I	N	P	L	T	A	I	W	N	C	P	N	G	E	L	R	H	H	P	Q	E	I	M	Q	I
Template Known Secondary structure																S	S	G	G	G	T	T		T								T	T	S	S						T	T																						T	T			G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	E	L	S	L	I	C	A	D	Q	G	.	.	I	N	V	W	E	L	I	R	L	A	N	R	H	P	R	V	N	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	W	F	I	V	A	Q	N	P	Q	Q	A	R	L	I	R	T	A
Query Conservation														.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.													.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		C	E	E	V	A	A	V	I	E	R	E	G	H	H	T	S	A	E	D	L	R	D	Y	V	M	Q	.	.	.	.	.	.	V	I	D	A	T	A	E	N	I	S	S	M	L	Q	D	I	R	A	L	R	H	T	E	I	D	Y	I	N	G	F	L	L	R	R	A	R	A	H	G	I	A	V	P	E	N	T	R	L
Template Known Secondary structure													T															.	.	.	.	.	.					T	T	T											T	T				S	G	G	G	T												T
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.							.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		289	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		282	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions