Job Description P27829 Confidence 98.69% Date Thu Jan 5 11:44:05 GMT 2012 Rank 130 Aligned Residues 148 % Identity 20% Template c1ez4B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution Resolution 2.30 Å

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		2	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.
Predicted Secondary structure						.	.	.																							.	.																																										.	.	.	.
Query SS confidence						.	.	.																							.	.																																										.	.	.	.
Query Sequence		S	F	A	T	.	.	.	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	.	.	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	G	G	F	L	R	.	.	.	.	A	S	T	T
Query Conservation						.	.	.																							.	.																																										.	.	.	.
Alig confidence						.	.	.																							.	.																	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	P	N	H	Q	K	V	V	L	V	G	D	G	A	V	G	S	S	Y	A	F	A	M	A	Q	Q	G	I	A	E	E	F	V	I	V	D	V	V	K	D	R	T	K	G	D	A	.	.	.	.	.	.	.	.	.	.	.	L	D	L	E	D	A	Q	A	F	T	A	P	K	K	I	Y	S	G	E	Y	S	D
Template Known Secondary structure			B	T	T	B									S														T			S							S	S									.	.	.	.	.	.	.	.	.	.	.					G	G	G	G	G	S										G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		P	V	E	A	D	A	W	L	I	A	V	P	T	P	F	K	G	D	H	E	P	D	M	.	.	.	.	.	.	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																							.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.																			.	.	.	.	.	.	.	.	.
Template Sequence		C	K	D	A	D	L	V	V	I	T	A	G	A	P	Q	K	P	G	E	S	R	L	D	L	V	N	K	N	L	N	I	L	S	S	I	V	K	P	V	V	D	S	G	F	D	G	I	F	L	V	A	.	.	A	N	P	V	D	I	L	T	Y	A	T	W	K	F	S	G	F	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	T	T		S												T	T																								T	T			S						.	.	S	S	S																.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.																			.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V	L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	R	V	I	G	S	G	T	S	L	D	S	S	R	L	R	V	A	L	G	K	Q	F	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T																T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																												155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions