Job Description P27829 Confidence 100.00% Date Thu Jan 5 11:44:05 GMT 2012 Rank 9 Aligned Residues 385 % Identity 22% Template c1dliA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose dehydrogenase; PDBTitle: the first structure of udp-glucose dehydrogenase (udpgdh) reveals the2 catalytic residues necessary for the two-fold oxidation Resolution 2.31 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		T	I	S	V	I	G	L	G	Y	I	G	L	P	T	A	A	A	F	A	S	R	Q	K	Q	V	I	G	V	D	I	N	Q	H	A	V	D	T	I	N	R	G	E	I	H	I	V	E	P	D	L	A	S	V	V	K	T	A	V	E	.	.	G	G	F	L	R	A	S	T	T	P	V	E	A	D	A	W	L	I	A
Query Conservation																																																													.	.
Alig confidence																					.																																								.	.
Template Conservation																					.
Template Sequence		K	I	A	V	A	G	S	G	Y	V	G	L	S	L	G	V	L	L	S	.	L	Q	N	E	V	T	I	V	D	I	L	P	S	K	V	D	K	I	N	N	G	L	S	P	I	Q	D	E	Y	I	E	Y	Y	L	K	S	K	Q	L	S	I	K	A	T	L	D	S	K	A	A	Y	K	E	A	E	L	V	I	I	A
Template Known Secondary structure									S											T	.	T	T	S							S										T	T			S	S												S								S										S
Template Predicted Secondary structure																					.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	P	T	P	F	K	G	D	.	H	E	P	D	M	T	Y	V	E	S	A	A	R	S	I	A	P	V	L	K	K	G	A	L	V	I	L	E	S	T	S	P	V	G	S	T	E	K	M	A	E	W	L	A	E	M	R	P	D	L	T	F	P	Q	Q	V	G	E	Q	A	D	V	N	I	A	Y	C	P	E	R	V
Query Conservation										.
Alig confidence										.																		.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	T	N	Y	N	S	R	I	N	Y	F	D	T	Q	H	V	E	T	V	I	K	E	V	L	S	.	V	N	S	H	A	T	L	I	I	K	S	T	I	P	I	G	F	I	T	E	M	R	Q	K	F	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	I	F	S	P	E	F	L
Template Known Secondary structure								T	T	T	T																	.			S	S							S				T	T										T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																	.	.	.	.	.	140	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.											.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	Q	V	M	V	E	L	I	K	N	D	R	V	I	G	G	M	T	P	V	C	S	A	R	A	S	E	L	Y	K	I	F	L	.	.	.	.	.	.	.	.	.	.	E	G	E	C	V	V	T	N	S	R	T	A	E	M	C	K	L	T	E	N	S	F	R	D	V	N	I	A	F	A	N	E	L	S	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	S	K	A	L	Y	D	N	L	Y	P	S	R	I	I	V	S	C	E	E	N	D	S	P	K	V	K	A	D	A	E	K	F	A	L	L	L	K	S	A	A	K	K	N	N	V	P	V	L	I	M	G	A	S	E	A	E	A	V	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	T
Template Known Secondary structure			T	T	S	T	T					S		S								T	T	S																				S	S	S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																											.
Query SS confidence																									.	.																											.
Query Sequence		I	C	A	D	Q	G	I	N	V	W	E	L	I	R	L	A	N	R	H	P	R	V	N	.	.	I	L	Q	P	G	P	G	V	G	G	H	C	I	A	V	D	P	W	F	I	V	A	Q	N	P	Q	.	Q	A	R	L	I	R	T	A	R	E	V	N	D	H	K	P	F	W	V	I	D	Q	V	K	A	A	V	A
Query Conservation																									.	.																											.
Alig confidence																									.	.																											.
Template Conservation
Template Sequence		Y	A	E	S	R	K	L	N	S	H	M	I	I	Q	G	I	S	Y	D	D	R	I	G	M	H	Y	N	N	P	S	F	G	Y	G	G	Y	C	L	P	K	D	T	K	Q	L	L	A	N	Y	N	N	I	P	Q	T	L	I	E	A	I	V	S	S	N	N	V	R	K	S	Y	I	A	K	Q	I	I	N	V	L	K
Template Known Secondary structure						T	T												T	S	T	T	T		S	S	S					S				S	S													T	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	L	A	A	T	D	K	R	A	S	E	L	K	I	A	C	F	G	L	A	F	K	P	N	I	D	D	L	R	E	S	P	A	M	E	I	A	E	L	I	A	Q	W	H	S	G	E	T	L	V	V	E	P	N	I	H	Q	L	P	K	K	L	T	G	L	C	T	L	A	Q	L	D	E	A	L	A	T	A	D
Query Conservation
Alig confidence			.	.	.	.	.	.																																					.																			.
Template Conservation			.	.	.	.	.	.																																					.																			.
Template Sequence		E	.	.	.	.	.	.	Q	E	S	P	V	K	V	V	G	V	Y	R	L	I	M	K	S	N	S	D	N	F	R	E	S	A	I	K	D	V	I	D	I	L	K	S	.	K	D	I	K	I	I	I	Y	E	P	M	L	N	K	L	E	S	E	.	D	Q	S	V	L	V	N	D	L	E	N	F	K	K	Q	A	N
Template Known Secondary structure		T	.	.	.	.	.	.	S			S	S										S	S	T	T		S			T	T												T	.	S	S								T	T		S				T	T	.			S														S
Template Predicted Secondary structure			.	.	.	.	.	.																																					.																			.
Template SS confidence
		304							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	M	L	V	D	H	S	Q	F	K	V	I	N	G	D	N	V	H	Q	Q	Y	V	V	D	A	K	G
Query Conservation
Alig confidence																.											.
Template Conservation																.											.
Template Sequence		I	I	V	T	N	R	Y	D	N	E	L	Q	D	V	.	K	N	K	V	Y	S	R	D	I	F	.	G	R	D
Template Known Secondary structure						S	S			G	G	G	G	G	G	.	G	G	G							S	.	S
Template Predicted Secondary structure																.											.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.		400	.	.