Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 11 Aligned Residues 335 % Identity 20% Template c3ip1C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:alcohol dehydrogenase, zinc-containing; PDBTitle: structure of putative alcohol dehydrogenase (tm_042) from thermotoga2 maritima Resolution 2.09 Å

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		1	.	.	.	.	.	.				.	.	10	.																										.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																														.
Query SS confidence									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																														.
Query Sequence		M	K	K	L	V	A	T	.	.	.	A	P	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	L	V	E	Y	E	D	R	A	.	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	.
Query Conservation									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																														.
Alig confidence									.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																.														.
Template Conservation																																																																			.
Template Sequence		L	R	A	V	R	L	H	A	K	W	D	P	R	P	E	F	K	L	G	P	K	D	I	E	G	K	L	T	W	L	G	S	K	V	W	R	Y	P	E	V	R	V	E	E	V	P	E	P	R	I	E	K	P	T	E	I	I	I	K	V	K	A	C	G	I	.	C	G	S	D	V	H	X	A	Q	T	D	E	E	G
Template Known Secondary structure															T	T					T	T		B	T	T	T	B	B	S		G	G	G	T																		S	T	T												.										B		T	T	S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.
										51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																							.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.	.	.	.																							.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	.	.	.	F	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	.	.	.	.	.	.	G	I	E	F	G	K	F	Q	L	G	N	.	.	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	G	P	L	S	E	T
Query Conservation		.	.	.	.	.	.	.	.																							.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.	.	.	.																							.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		Y	I	L	Y	P	G	L	T	G	F	P	V	T	L	G	H	E	F	S	G	V	V	V	E	A	G	P	E	A	I	N	R	R	T	N	K	R	F	E	I	G	E	P	V	C	A	E	E	X	L	W	C	G	H	C	R	P	C	A	E	G	F	P	N	H	C	E	N	L	N	E	L	G	F	N	V	D	G	A	F
Template Known Secondary structure		B	B	S			S		B		S	S																T	T				T	T	T	T					T	T							S					S		S					T	T		G	G	G		T	T				B	T	T	T	B			S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M	.	.	.	.	.	.	.	.	.	S	G	V	R	D	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	Y	V	K	V	D	A	K	Y	A	W	S	L	R	E	L	E	G	V	Y	E	G	D	R	L	F	L	A	G	S	L	V	E	P	T	S	V	A	Y	N	A	V	I	V	R	G	G	G	I	R	P	G	D	N	V	V	I	L	G	G	G	P	I	G	L	A	A	V	A	I	L	K	H	A	G	A	S	K	V
Template Known Secondary structure		B	S						G	G	G					G	G	G	T	T	T	S		T	T								T												T	T	T	T					T	T									S													T	T		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I	I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	.	.	.	I	S	Y	V	A	F	A	K	P	F
Query Conservation																																																																					.	.	.
Alig confidence																																																																					.	.	.
Template Conservation
Template Sequence		I	L	S	E	P	S	E	V	R	R	N	L	A	K	E	L	G	A	D	H	V	I	D	P	T	K	E	N	F	V	E	A	V	L	D	Y	T	N	G	L	G	A	K	L	F	L	E	A	T	G	V	P	Q	L	V	W	P	Q	I	E	E	V	I	W	R	A	R	G	I	N	A	T	V	A	I	V	A	R	A	D
Template Known Secondary structure						S												T		S					T	T	T	S										T	T	T				S						S	S																	S										S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.																.																								.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.																.																								.	.
Template Sequence		A	K	I	P	L	T	G	E	V	F	Q	V	R	R	A	Q	I	V	G	S	Q	G	H	S	.	.	.	.	.	.	.	.	.	.	G	H	G	T	F	P	R	V	I	S	L	X	A	S	G	.	X	D	X	T	K	I	I	S	K	T	V	S	X	E	E	I	P	E	Y	I	K	R	L	.	.	Q	T	D	K	S
Template Known Secondary structure		S												T	T											.	.	.	.	.	.	.	.	.	.	S	T	T											T	T	.			G	G	G	G							G	G	G								T	.	.	T	T		T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																.																								.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.											.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.
		343	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	K	M	G	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	K	V	T	X	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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