 |
Job Description | P76043 | Confidence | 46.86% | Date | Thu Jan 5 12:17:44 GMT 2012 |
Rank | 187 | Aligned Residues | 114 |
% Identity | 16% | Template | c3e7pA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative methyltransferase; |
PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482
|
Resolution | 1.90 Å |
|
 |
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | Q | F | A | M | S | G | V | R | D | A | N | V | R | V | G | D | F | V | V | V | V | G | L | G | A | I | G | Q | I | A | I | Q | L | A | K | R | A | G | A | S | V | V | I | G | V | D | P | I | A | H | R | C | D | I | A | R | R | H | G | A | D | F | C | L | N | P | I | G | T | D | V | G | K | E | I | K | T | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|   | . |
|   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | E | V | T | L | K | A | L | S | F | I | D | N | L | T | N | K | S | L | I | A | D | L | G | C | G | T | . |
G | G | Q | T | M | I | L | A | Q | H | V | P | G | K | I | T | G | I | D | F | F | P | G | F | I | E | R | F | N | K | N | A | E | K | L | N | L | Q | N | R | V | K | G | I | V | G | S | M | D | D | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
|
|
|
| T | T |
|  |  |  |  |  | T |
| T | T | . |
|  |  |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |  |  |  |  |  |
|
| T | T | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | G | K | Q | G | A | D | V | I | I | E | T | S | . |
. |
. |
. |
. |
G | Y | A | D | A | L | Q | S | A | L | R | G | L | A | Y | G | G | T | I | S | Y | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
F | E | K | D | S | L | D | L | I | W | S | E | G | A | I | Y | N | I | G | F | E | R | G | L | K | E | W | R | N | Y | L | K | P | G | G | Y | L | A | V | S |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |  |  |  | S |
| G | G | G | T |
|  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|