Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 16 Aligned Residues 334 % Identity 19% Template c3cosD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:alcohol dehydrogenase 4; PDBTitle: crystal structure of human class ii alcohol dehydrogenase (adh4) in2 complex with nad and zn Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure													.																																									.	.
Query SS confidence													.																																									.	.
Query Sequence		M	K	K	L	V	A	T	A	P	R	V	.	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	.	.	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G	I	E	F	G
Query Conservation													.																																									.	.
Alig confidence													.																												.													.	.
Template Conservation																																									.
Template Sequence		C	K	A	A	I	A	W	E	A	G	K	P	L	C	I	E	E	V	E	V	A	P	P	K	A	H	E	V	R	I	Q	I	I	A	T	S	L	C	H	.	T	D	A	T	V	I	D	S	K	F	E	G	L	A	F	P	V	I	V	G	H	E	A	A	G	I	V	E	S	I	G	P	G	V	T	N	V	K	P	G
Template Known Secondary structure							B		S	T	T	S														T	T														.						T	S	T	T			S			S	S	B															T	T			S			T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																																.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	Q	L	G	N	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		D	K	V	I	P	L	Y	A	P	L	.	.	.	.	C	R	K	C	K	F	C	L	S	P	L	T	N	L	C	G	K	I	S	N	L	K	S	P	A	S	D	Q	Q	L	M	E	D	K	T	S	R	F	T	C	K	G	K	P	V	Y	H	F	F	G	T	S	T	F	S	Q	Y	T	V	V	S	D	I	N	L	A
Template Known Secondary structure								S	S			.	.	.	.		S	S	S	T	T	T	T		T	T					T	T					S		G	G	G	S		S	S		T	T	S			S				T	T				B		S	T	T	T		T	T	B	S						T	T	S
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		K	M	P	Q	G	S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M	S	G	V	R	D	.	.	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		K	I	D	D	D	A	N	L	E	R	V	C	L	L	G	C	G	F	S	T	G	Y	G	A	A	I	N	N	A	K	V	T	P	G	S	T	C	A	V	F	G	L	G	G	V	G	L	S	A	V	M	G	C	K	A	A	G	A	S	R	I	I	G	I	D	I	N	S	E	K	F	V	K	A	K	A	L	G	A	T
Template Known Secondary structure					T	T							G	G	G	G	T											T	T	T				T	T									S													T	T		S							S		G	G	G							T	T		S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		205	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		F	C	L	N	P	I	G	T	.	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I	I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	K	P	F	A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		D	C	L	N	P	R	D	L	H	K	P	I	Q	E	V	I	I	E	L	T	K	G	G	V	D	F	A	L	D	C	A	G	G	S	E	T	M	K	A	A	L	D	C	T	T	A	G	W	G	S	C	T	F	I	G	V	A	A	G	S	K	G	L	T	V	F	P	E	E	L	I	I	G	R	T	I	N	G	T	F
Template Known Secondary structure						G	G	G		S	S											T	S		B	S						S		S										T	B		T	T	T										T	T								T					T	T							S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V	T	F
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation								.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		F	G	G	W	K	S	.	.	.	.	.	.	.	.	V	D	S	I	P	K	L	V	T	D	Y	K	N	K	K	F	N	L	D	A	L	V	T	H	T	L	P	F	D	K	I	S	E	A	F	D	L	M	.	.	.	N	Q	G	K	S	I	R	T	I	L	I	F
Template Known Secondary structure		G	G	G				.	.	.	.	.	.	.	.													T	T	S	S		S	G	G	G							G	G	G									.	.	.		T	T			S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		325	.	.	.	.	330									.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.				.	370	.	.	.	.	.	.	.	.	.	380

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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