Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 20 Aligned Residues 332 % Identity 15% Template c2vwpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: haloferax mediterranei glucose dehydrogenase in complex2 with nadph and zn. Resolution 2.01 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure									.																																													.	.	.	.	.
Query SS confidence									.																																													.	.	.	.	.
Query Sequence		M	K	K	L	V	A	T	.	A	P	R	V	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	.	.	.	.	.	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G	I
Query Conservation									.																																													.	.	.	.	.
Alig confidence									.																																.													.	.	.	.	.																		.	.
Template Conservation																																									.																																			.	.
Template Sequence		M	K	A	I	A	V	K	R	G	E	D	R	P	V	V	I	E	K	P	R	P	E	P	E	S	G	E	A	L	V	R	T	L	R	V	G	V	D	G	.	T	D	H	E	V	I	A	G	G	H	G	G	F	P	E	G	E	D	H	L	V	L	G	H	E	A	V	G	V	V	V	D	P	N	.	.	D	T	E	L
Template Known Secondary structure									T	T			S													T	T														.								T		T	T	S	S		T	T		S																T	.	.	T	S	S
Template Predicted Secondary structure																																									.																																			.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.
		75	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																								.	.	.
Query SS confidence											.	.	.	.																								.	.	.
Query Sequence		E	F	G	K	F	Q	L	G	N	.	.	.	.	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	.	.	.	G	Y	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M
Query Conservation											.	.	.	.																								.	.	.
Alig confidence											.	.	.	.																								.	.	.
Template Conservation
Template Sequence		E	E	G	D	I	V	V	P	T	V	R	R	P	P	A	S	G	T	N	E	Y	F	E	R	D	Q	P	D	M	A	P	D	G	M	Y	F	E	R	G	I	V	G	A	H	G	Y	M	S	E	F	F	T	S	P	E	K	Y	L	V	R	I	P	R	S	Q	A	E	L	G	F	L	I	E	P	I	S	I	T	E	K
Template Known Secondary structure			T	T							S					T	T								T	T		G	G	G			T	T	S					T	T	B					S		B	S						G	G	G						G	G	G	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		148	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure							.	.	.	.	.																														.
Query SS confidence							.	.	.	.	.																														.
Query Sequence		S	G	V	R	D	.	.	.	.	.	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	.	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T	L
Query Conservation							.	.	.	.	.																														.
Alig confidence							.	.	.	.	.																														.
Template Conservation
Template Sequence		A	L	E	H	A	Y	A	S	R	S	A	F	D	W	D	P	S	S	A	F	V	L	G	N	G	S	L	G	L	L	T	L	A	M	L	K	V	D	D	K	G	Y	E	N	L	Y	C	L	G	R	R	D	R	P	D	P	T	I	D	I	I	E	E	L	D	A	T	Y	V	D	S	R	Q	T	P	V	E	D	V	P
Template Known Secondary structure										T	T	T	S													S														T	T			S										S	S										T	T						T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		T	G	K	Q	G	A	D	V	I	I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	K	P	F	A	E	G	.	.	.	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	Y	E	Q	M	D	F	I	Y	E	A	T	G	F	P	K	H	A	I	Q	S	V	Q	A	L	A	P	N	G	V	G	A	L	L	G	V	P	S	D	W	A	F	E	V	D	A	G	A	F	H	R	E	M	V	L	H	N	K	A	L	V	G	S	V	N	S	H	.	.	.	.	.	.	.	.	.	.	V	E
Template Known Secondary structure				T										S																																												T	T											.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.											.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V	T	F
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		H	F	E	A	A	T	V	T	F	T	K	L	P	K	W	F	L	E	D	L	V	T	G	V	H	P	L	S	E	F	E	A	A	F	D	.	.	.	.	.	D	D	D	T	T	I	K	T	A	I	E	F
Template Known Secondary structure													S															G	G	G	G	G	G	G	G		.	.	.	.	.		S	T	T
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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