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Job Description | P76043 | Confidence | 22.11% | Date | Thu Jan 5 12:17:44 GMT 2012 |
Rank | 274 | Aligned Residues | 99 |
% Identity | 22% | Template | c2q41D_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:spermidine synthase 1; |
PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820
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Resolution | 2.70 Å |
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157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
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. | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
V | G | D | F | V | V | V | V | G | L | G | A | I | G | Q | I | A | I | Q | L | A | K | R | A | G | A | S | V | V | I | G | V | D | P | I | A | H | R | C | D | I | A | R | R | H | G | . |
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A | D | F | C | L | N | P | I | G | T | D | V | G | K | E | I | K | T | L | T | G | K | Q | G | A | D | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | N | P | K | K | V | L | V | I | G | G | G | D | G | G | V | L | R | E | V | A | R | H | A | S | I | E | Q | I | D | X | C | E | I | D | K | X | V | V | D | V | S | K | Q | F | F | P | D | V | A | I | G | Y | E | D | P | R | V | N | L | V | I | G | D | G | V | A | F | L | K | N | A | A | E | G | S | Y | D | A | V |
Template Known Secondary structure |   |
S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
119 | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
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230 | . | . | . | . | . | |
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. | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | I | E | T | S | G | . |
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Y | A | D | A | L | Q | S | A | L | R | G | L | A | Y | G | G | T | I | S | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | V | D | S | S | D | P | I | G | P | A | K | E | L | F | E | K | P | F | F | Q | S | V | A | R | A | L | R | P | G | G | V | V | C | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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