Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 48 Aligned Residues 313 % Identity 10% Template c2j3iB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent oxidoreductase p1; PDBTitle: crystal structure of arabidopsis thaliana double bond2 reductase (at5g16970)-binary complex Resolution 2.8 Å

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		1	.	.	.	.	.	.	.								.	10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.			.	60	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.															.	.	.																														.	.	.	.	.								.	.
Query SS confidence										.	.	.	.	.	.	.															.	.	.																														.	.	.	.	.								.	.
Query Sequence		M	K	K	L	V	A	T	A	.	.	.	.	.	.	.	P	R	V	A	A	L	V	E	Y	E	D	R	A	I	.	.	.	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	.	.	.	.	.	I	D	E	D	F	N	G	.	.	E	W	Q	M	F
Query Conservation										.	.	.	.	.	.	.															.	.	.																														.	.	.	.	.								.	.
Alig confidence										.	.	.	.	.	.	.															.	.	.																	.													.	.	.	.	.								.	.
Template Conservation																																																		.
Template Sequence		N	K	Q	V	I	L	K	D	Y	V	S	G	F	P	T	E	S	D	F	D	F	T	T	T	T	V	E	L	R	V	P	E	G	T	N	S	V	L	V	K	N	L	Y	L	S	C	D	P	.	Y	M	R	I	R	M	G	K	P	D	P	S	T	A	A	L	A	Q	A	Y	T	P	G	Q	P	I	Q	G	Y	G	V
Template Known Secondary structure				B				S	S		B	S	S	S			G	G	G											S				S	S	S													G	.	G	G	G	T	T	T	B				T	T	T	T			.					T	T	S	B
Template Predicted Secondary structure																																																		.
Template SS confidence
		1005	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.		.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		T	P	R	P	A	D	A	P	R	G	I	E	F	G	K	F	Q	L	G	N	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N	A	V	C	.	.	.	Y
Query Conservation																																																																														.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	R	I	I	E	S	G	H	P	D	Y	K	K	G	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	I	V	A	W	E	E	Y	S	V	I	T	P	M	T	H	A	H	F	K	I	Q	H	T	D	V	P	L	S	Y	Y	T	G	L	L	G	M
Template Known Secondary structure									S	T	T			T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	B	S	S							T	T	T								S	S		G	G	G	G	G	T	T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1084	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100																										.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	Q	F	A	M	S	G	V	R	D	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	M	T	A	Y	A	G	F	Y	E	V	C	S	P	K	E	G	E	T	V	Y	V	S	A	A	S	G	A	V	G	Q	L	V	G	Q	L	A	K	M	M	G	C	Y	V	V	G	S	A	G	S	K	E	K	V	D	L	L	K	T	K	F	G	F	D	D	A	F	N	Y	K	E	E	S	D	L	T	A	A	L
Template Known Secondary structure												T	T	S				T	T						S	S		S	S	T	T										T	T	T								S	S	T	T							T	T	T			S					T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1139	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		L	T	G	K	Q	G	A	D	V	I	I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	.	.	.	.	K	P	F	A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S
Query Conservation																																									.	.	.	.
Alig confidence																																									.	.	.	.																																	.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		K	R	C	F	P	N	G	I	D	I	Y	F	E	N	V	G	G	K	M	L	D	A	V	L	V	N	M	N	M	H	G	R	I	A	V	C	G	M	I	S	Q	Y	N	L	E	N	Q	E	G	V	H	N	L	S	N	I	I	Y	K	R	N	R	I	Q	G	F	V	V	S	D	F	Y	D	K	Y	.	.	.	.	.
Template Known Secondary structure						T	T		B	S					S	S		T										B		T	T									T	T	G	G	G		S	S							G	G	G	G	G	T	S									G	G	G	G	T	T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V	T
Query Conservation
Alig confidence		.																		.	.																											.	.
Template Conservation		.																		.	.																											.	.
Template Sequence		.	S	K	F	L	E	F	V	L	P	H	I	R	E	G	K	I	T	.	.	Y	V	E	D	V	A	D	G	L	E	K	A	P	E	A	L	V	G	L	F	H	G	K	N	V	G	.	.	K	Q	V	V	V
Template Known Secondary structure		.												T	T	T	S			.	.							B	S	G	G	G								T	T	T	T			S	S	.	.
Template Predicted Secondary structure		.																		.	.																											.	.
Template SS confidence
			1294	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310			.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.			.	.	.	1340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions