Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 5 Aligned Residues 329 % Identity 19% Template c2dphA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formaldehyde dismutase; PDBTitle: crystal structure of formaldehyde dismutase Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																										.
Query SS confidence																												.	.	.	.	.	.																										.
Query Sequence		M	K	K	L	V	A	T	A	P	R	V	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	.	.	.	.	.	.	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	.	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G
Query Conservation																												.	.	.	.	.	.																										.
Alig confidence																												.	.	.	.	.	.													.													.
Template Conservation																																														.
Template Sequence		N	K	S	V	V	Y	H	G	T	R	D	L	R	V	E	T	V	P	Y	P	K	L	E	H	N	N	R	K	L	E	H	A	V	I	L	K	V	V	S	T	N	I	C	G	.	S	D	Q	H	I	Y	R	G	R	F	I	V	P	K	G	H	V	L	G	H	E	I	T	G	E	V	V	E	K	G	S	D	V	E	L
Template Known Secondary structure										T	T												S			T	T				T	T														.							T	T	S	S				T	T		B														T	T			S
Template Predicted Secondary structure																																														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	F	G	K	F	Q	L	G	N	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		M	D	I	G	D	L	V	S	V	P	F	N	V	.	.	.	.	A	C	G	R	C	R	N	C	K	E	A	R	S	D	V	C	E	N	N	L	V	N	P	D	A	D	L	G	A	F	G	F	D	L	K	G	W	S	G	G	Q	A	E	Y	V	L	V	P	Y	A	D	Y	M	L	L	K	F	G	D	K	E	Q	A
Template Known Secondary structure				T	T							S	B		.	.	.	.			S		S					T	T		G	G	G				T	T	T		S	S	S	S			B	T	T	T	T	B	S	S				S	S	B	S					S	S									S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
									137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	V	C	Y	D	P	A	Q	F	A	M	S	G	V	R	D	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	K	I	K	D	L	T	L	I	S	D	I	L	P	T	G	F	H	G	C	V	S	A	G	V	K	P	G	S	H	V	Y	I	A	G	A	G	P	V	G	R	C	A	A	A	G	A	R	L	L	G	A	A	C	V	I	V	G	D	Q	N	P	E	R	L	K	L	L	S	D	A	G	F	E	T	I	D	L	R
Template Known Secondary structure				T					T	T	T	T	T												T	T			T	T									S														T		S							S										T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.															.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.												.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I	I	E	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	K	P	F	.	.	.	.	.	.	.	.	.	.	.	A	E
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	A	P	L	R	D	Q	I	D	Q	I	L	G	K	P	E	V	D	C	G	V	D	A	V	G	F	E	A	H	G	L	G	D	E	A	N	T	E	T	P	N	G	A	L	N	S	L	F	D	V	V	R	A	G	G	A	I	G	I	P	G	I	Y	V	G	S	D	P	D	P	V	N	K	D	A	G	S	G	R
Template Known Secondary structure		S	S	S											S	S	S									S		T	T		B		S	G	G	G	T	T	S	B		T	T																				S				S			S	S		S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	.	.	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q
Query Conservation																																																							.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																						.	.																								.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template Sequence		L	H	L	D	F	G	K	M	W	T	K	S	I	R	I	M	T	G	M	A	P	.	.	.	.	.	.	.	.	.	.	.	V	T	N	Y	N	R	H	L	T	E	A	I	L	W	D	Q	M	P	Y	L	S	K	V	M	N	I	E	V	I	T	L	D	Q	A	P	D	G	Y	A	K	F	D	K	G	S	P	.	.
Template Known Secondary structure												T	T						S	S			.	.	.	.	.	.	.	.	.	.	.	G	G	G	T										T	T																S	T	T										T	T		S	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																																															.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.												.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		343	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	K	M	G	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	K	F	V	I
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			385	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions