Job Description P76043 Confidence 34.69% Date Thu Jan 5 12:17:44 GMT 2012 Rank 224 Aligned Residues 100 % Identity 11% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	.	.	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I
Query Conservation																																																					.	.
Alig confidence																										.	.	.																									.	.
Template Conservation																										.	.	.
Template Sequence		C	T	K	K	E	L	K	E	V	L	I	V	D	G	F	D	L	E	L	A	H	Q	L	F	.	.	.	K	Y	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N	F	T	H	A	K	Q	L	L	D	L	D	I	K	K	Y	D	L	I	F
Template Known Secondary structure		T	T	S	S									S	S										T	.	.	.	T	S	S								S						G	G	G	T	T	T	S	T	T						T		T	T					S	S	G	G	G	S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	L	Q	E	P	D	I	H	R	I	D	G	L	K	R	M	L	K	E	D	G	V	F	I	S
Template Known Secondary structure			S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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