Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 56 Aligned Residues 312 % Identity 12% Template c1zsvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase Resolution 2.30 Å

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		1	.	.	.	.	.	.	.								.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		M	K	K	L	V	A	T	A	.	.	.	.	.	.	.	P	R	V	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																															.													.																			.	.	.
Template Conservation																																															.													.																			.	.	.
Template Sequence		T	K	T	W	T	L	K	K	H	F	V	G	Y	P	T	N	S	D	F	E	L	K	T	S	E	L	P	P	L	K	N	G	E	V	L	L	E	A	L	F	L	T	V	D	P	.	Y	M	R	V	A	A	K	R	L	K	E	G	.	D	T	M	M	G	Q	Q	V	A	K	V	V	E	S	K	N	V	A	.	.	.
Template Known Secondary structure								S	S			S	S	S			G	G	G													T	T													T	.						G	G	G	S		T	T	.		B													S		T	T	.	.	.
Template Predicted Secondary structure																																															.													.																			.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	F	G	K	F	Q	L	G	N	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M	S	G	V	R	D	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	K	G	T	I	V	L	A	S	P	G	W	T	T	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	D	G	K	D	L	E	K	L	L	T	E	W	P	D	T	I	P	L	S	L	A	L	G	T	V	G	M	P	G	L	T	A	Y	F	G	L	L	E	I	C
Template Known Secondary structure		S		T	T									S	B	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T						T	T			T	T	S		G	G	G	G	G	T	T	T	S												T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	K	G	G	E	T	V	M	V	N	A	A	A	G	A	V	G	S	V	V	G	Q	I	A	K	L	K	G	C	K	V	V	G	A	V	G	S	D	E	K	V	A	Y	L	Q	K	L	G	F	D	V	V	F	N	Y	K	T	V	E	S	L	E	E	T	L	K	K	A	S	P	D	G	Y	D	C	Y	F	D	N
Template Known Secondary structure					S	S						S	S	T	T	S	T	T											T	T								S	S										T	T		S					T	T	T		S											T	T								S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	.	.	.	.	.	K	P	F	A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L
Query Conservation																												.	.	.	.	.
Alig confidence				.																								.	.	.	.	.																																	.	.	.	.	.
Template Conservation				.																																																													.	.	.	.	.
Template Sequence		V	G	.	G	E	F	S	N	T	V	I	G	Q	M	K	K	F	G	R	I	A	I	C	G	A	I	S	T	Y	N	R	T	G	P	L	P	P	G	P	P	P	E	I	V	I	Y	Q	E	L	R	M	E	A	F	V	V	Y	R	W	Q	G	D	A	.	.	.	.	.	R	Q	K	A	L	K	D	L	L	K	W	V
Template Known Secondary structure		S		.									T	T													G	G	G	T	T			S	S													T	T								G	G	G						.	.	.	.	.
Template Predicted Secondary structure				.																																																													.	.	.	.	.
Template SS confidence
		218	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.						280	.	.	.	.	.	.	.	.	.	290	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V
Query Conservation
Alig confidence								.	.																											.	.
Template Conservation								.	.																											.	.
Template Sequence		L	E	G	K	I	Q	.	.	Y	K	E	Y	I	I	E	G	F	E	N	M	P	A	A	F	M	G	M	L	K	G	D	N	L	G	.	.	K	T	I	V
Template Known Secondary structure			T	T	S	S		.	.									G	G	G										T	T			S	S	.	.
Template Predicted Secondary structure								.	.																											.	.
Template SS confidence
		292	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions