Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 2 Aligned Residues 332 % Identity 18% Template c1pl6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		M	K	K	L	V	A	T	A	P	R	V	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	.	.	.	.	.	P	F	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G	I	E
Query Conservation																																																			.	.	.	.	.
Alig confidence																																								.											.	.	.	.	.
Template Conservation																																								.
Template Sequence		N	L	S	L	V	V	H	G	P	G	D	L	R	L	E	N	Y	P	I	P	E	P	G	P	N	E	V	L	L	R	X	H	S	V	G	I	C	G	.	S	D	V	H	Y	W	E	Y	G	R	I	G	N	F	I	V	K	K	P	X	V	L	G	H	E	A	S	G	T	V	E	K	V	G	S	S	V	K	H	L	K
Template Known Secondary structure										T	T														T	T														.									S			T	T					S																	T	T			S
Template Predicted Secondary structure																																								.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure												.	.																						.
Query SS confidence												.	.																						.
Query Sequence		F	G	K	F	Q	L	G	N	M	V	.	.	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	.	G	Y	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G	S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M	S	G	V	R	D
Query Conservation												.	.																						.
Alig confidence												.	.																						.
Template Conservation
Template Sequence		P	G	D	R	V	A	I	E	P	G	A	P	R	E	N	D	E	F	C	K	X	G	R	Y	N	L	S	P	S	I	F	F	C	A	T	P	P	D	D	G	N	L	C	R	F	Y	K	H	N	A	A	F	C	Y	K	L	P	D	N	V	T	F	E	E	G	A	L	I	E	P	L	S	V	G	I	H	A	C	R	R
Template Known Secondary structure		T	T							S				S	S							T	T		G	G	G		T	T				T	T	S	T	T	S					B	S						G	G	G						T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I	G	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	.	.	A	D	V	I
Query Conservation																																																																												.	.
Alig confidence																																																																												.	.
Template Conservation
Template Sequence		G	G	V	T	L	G	H	K	V	L	V	C	G	A	G	P	I	G	X	V	T	L	L	V	A	K	A	X	G	A	A	Q	V	V	V	T	D	L	S	A	T	R	L	S	K	A	K	E	I	G	A	D	L	V	L	Q	I	S	K	E	S	P	Q	E	I	A	R	K	V	E	G	Q	L	G	C	K	P	E	V	T
Template Known Secondary structure			T			T	T									S													T	T		S							S											T	T		S						S	S															T	S			S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	K	P	F	A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N	P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L	M	N
Query Conservation
Alig confidence																																					.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	C	T	G	A	E	A	S	I	Q	A	G	I	Y	A	T	R	S	G	G	T	L	V	L	V	G	L	G	S	E	X	T	T	V	.	.	P	L	L	H	A	A	I	R	E	V	D	I	K	G	V	F	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	C	N	T	W	P	V	A	I	S	X	L	A	S
Template Known Secondary structure					S													S		T	T							S				S	S				.	.							T	T	T								S		.	.	.	.	.	.	.	.	.	.	.	.	S	S											T
Template Predicted Secondary structure																																					.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.													300	.	.	.	.	.	.	.	.	.	310	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V	T	F
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		K	S	V	N	V	K	P	L	V	T	H	R	F	P	L	E	K	A	L	E	A	F	E	T	F	.	.	.	K	K	G	L	G	L	K	I	X	L	K	C
Template Known Secondary structure		T	S				G	G	G							G	G	G									.	.	.		T	T		S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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