Job Description P76043 Confidence 100.00% Date Thu Jan 5 12:17:44 GMT 2012 Rank 12 Aligned Residues 333 % Identity 19% Template c1p0fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: crystal structure of the binary complex: nadp(h)-dependent vertebrate2 alcohol dehydrogenase (adh8) with the cofactor nadp Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																									.
Query SS confidence													.																																									.
Query Sequence		M	K	K	L	V	A	T	A	P	R	V	.	A	A	L	V	E	Y	E	D	R	A	I	L	A	N	E	V	K	I	R	V	R	F	G	A	P	K	H	G	T	E	V	V	D	F	R	A	A	S	P	F	.	I	D	E	D	F	N	G	E	W	Q	M	F	T	P	R	P	A	D	A	P	R	G	I	E	F	G	K
Query Conservation													.																																									.
Alig confidence													.																												.													.
Template Conservation																																									.
Template Sequence		C	K	A	A	V	A	W	E	P	H	K	P	L	S	L	E	T	I	T	V	A	P	P	K	A	H	E	V	R	I	K	I	L	A	S	G	I	C	G	.	S	D	S	S	V	L	K	E	I	I	P	S	K	F	P	V	I	L	G	H	E	A	V	G	V	V	E	S	I	G	A	G	V	T	C	V	K	P	G	D
Template Known Secondary structure							B	S	S	T	T	S														T	T														.							T	T	S	S				S	S	B															T	T			S			T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		1009	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.		.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Q	L	G	N	M	V	V	G	D	I	I	E	C	G	S	D	V	T	D	Y	A	V	G	D	S	V	C	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	L	S	E	T	V	I	I	N	A	V	N	N	Y	K	L	R	K	M	P	Q	G
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		K	V	I	P	L	F	V	P	Q	.	.	.	.	C	G	S	C	R	A	C	K	S	S	N	S	N	F	C	E	K	N	D	M	G	A	K	T	G	L	M	A	D	M	T	S	R	F	T	C	R	G	K	P	I	Y	N	L	M	G	T	S	T	F	T	E	Y	T	V	V	A	D	I	A	V	A	K	I	D	P	K
Template Known Secondary structure							S	S			.	.	.	.		S	S	S						T	T					T	T		S	T	T	T				S		T	T	S			S				T	T				B		S	T	T	T			S	B	S						T	T	S						T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		1088	.	1090	.	.	.	.	.	.					.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		S	S	W	K	N	A	V	C	Y	D	P	A	Q	F	A	M	S	G	V	R	D	.	A	N	V	R	V	G	D	F	V	V	V	V	G	L	G	A	I	G	Q	I	A	I	Q	L	A	K	R	A	G	A	S	V	V	I	G	V	D	P	I	A	H	R	C	D	I	A	R	R	H	G	A	D	F	C	L	N	P	I
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		A	P	L	E	S	C	L	I	G	C	G	F	A	T	G	Y	G	A	A	V	N	T	A	K	V	T	P	G	S	T	C	A	V	F	G	L	G	G	V	G	F	S	A	I	V	G	C	K	A	A	G	A	S	R	I	I	G	V	G	T	H	K	D	K	F	P	K	A	I	E	L	G	A	T	E	C	L	N	P	K
Template Known Secondary structure				G	G	G	G	G	G	G	T											T	T	T				T	T									S														T		S							S		G	G	G							T	T		S					G	G
Template Predicted Secondary structure
Template SS confidence
		1164	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.
		211		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		G	.	T	D	V	G	K	E	I	K	T	L	T	G	K	Q	G	A	D	V	I	I	E	T	S	G	Y	A	D	A	L	Q	S	A	L	R	G	L	A	Y	G	G	T	I	S	Y	V	A	F	A	K	P	F	A	E	G	F	N	L	G	R	E	A	H	F	N	N	A	K	I	V	F	S	R	A	C	S	E	P	N
Query Conservation			.
Alig confidence			.																																																																														.
Template Conservation																																																																																	.
Template Sequence		D	Y	D	K	P	I	Y	E	V	I	C	E	K	T	N	G	G	V	D	Y	A	V	E	C	A	G	R	I	E	T	M	M	N	A	L	Q	S	T	Y	C	G	S	G	V	T	V	V	L	G	L	A	S	P	N	E	R	L	P	L	D	P	L	L	L	L	T	G	R	S	L	K	G	S	V	F	G	G	F	K	.
Template Known Secondary structure		G		S	S										T	T	S		B	S						S												T	B		T	T	T											T	T							T					T	T							S	G	G	G			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		1244	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	Y	P	R	W	S	R	K	R	I	E	E	T	C	W	E	L	L	M	N	G	Y	L	N	C	E	D	L	I	D	P	V	V	T	F	A	N	S	P	E	S	Y	M	Q	Y	V	D	Q	H	P	E	Q	S	I	K	M	G	V	T	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	E	E	V	S	R	L	V	D	D	Y	M	K	K	K	I	N	V	N	F	L	V	S	T	K	L	T	L	D	Q	I	N	K	A	F	E	L	L	.	.	.	S	S	G	Q	G	V	R	S	I	M	I	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	G	G	G										T	T	S	S		G	G	G	G							G	G	G								T	.	.	.	T	T	S	S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
										1323	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360				.	.	.	.	.	.	.	.	.	1370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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