Return to main results Retrieve Phyre Job Id

Job DescriptionP76043
Confidence100.00%DateThu Jan 5 12:17:44 GMT 2012
Rank40Aligned Residues328
% Identity14%Templatec1lluD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:alcohol dehydrogenase; PDBTitle: the ternary complex of pseudomonas aeruginosa alcohol2 dehydrogenase with its coenzyme and weak substrate
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.........50 .........60.........70......
Predicted Secondary structure 




.













...


















Query SS confidence 










.






































. . .

























Query Sequence  MKKLVATAPRV. AALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASP. . . FIDEDFNGEWQMFTPRPADAPRGIEF
Query Conservation 


 
   
  .
   
 
 
     





 
 


   
     
   ...  
   
 
  
 
   
  
     
Alig confidence 










.


























.










...

























Template Conservation 


 
    
  
 
     
     





 
  

 . 
     
        
 
 
 
  
 
  

  
    
Template Sequence  MKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCH. TDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKE
Template Known Secondary structure 
BB
BTTB








TT


.TT
SSS


SSB


S

TT

S

T
Template Predicted Secondary structure 













.























Template SS confidence 















































































   7..10.........20.........30.........40..... ....50.........60.........70.........80.....
 
   77..80.........90.........100...... ...110.........120.........130.........140.........150...
Predicted Secondary structure 


















...


























Query SS confidence 





























. . .














































Query Sequence  GKFQLGNMVVGDIIECGSDVTDYAVGDSVC. . . GYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDA
Query Conservation 
  
            
             ...                                               
Alig confidence 





























...














































Template Conservation 



                                                                            
Template Sequence  GDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQ
Template Known Secondary structure  T

S

SSSTTTTTT
GGG
TT
BTTTB

SSBS
TTTS

TTS
GGGGT
Template Predicted Secondary structure 
































































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  NVRVGDFVVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEIKTLTGKQGADVIIET
Query Conservation                                                                              
   
Alig confidence 





































































..







Template Conservation                                 
                                      ..        
Template Sequence  TNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIG. . GAHGVLVT
Template Known Secondary structure  T

TTS

STTTT
S
TT
STTTS
TS..S
Template Predicted Secondary structure 































..







Template SS confidence 















































































   166...170.........180.........190.........200.........210.........220.........230..... ....240...
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  SGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYL
Query Conservation   
               
 

  
                     
 
                         
   
 
Alig confidence 































..


















...........















Template Conservation                                  ..           
 
     ...........         

  
 
Template Sequence  AVSNSAFGQAIGMARRGGTIALVGLPPGDFPT. . PIFDVVLKGLHIAGSIVGT. . . . . . . . . . . RADLQEALDFAGEGLV
Template Known Secondary structure 


S




S



..
TT


S

...........TTS
Template Predicted Secondary structure 


















..






...........



Template SS confidence 















































































   244.....250.........260.........270..... ....280.........290.... .....300.........310
 
   314.....320.........330.........340.........
Predicted Secondary structure 








Query SS confidence 



































Query Sequence  NCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVT
Query Conservation      

     

    
   
         



 
Alig confidence 

...























..




Template Conservation    ...      

    
   
  
   
..



 
Template Sequence  KA. . . TIHPGKLDDINQILDQMRAGQIEG. . RIVLE
Template Known Secondary structure 

...

GGGTT

SS..
Template Predicted Secondary structure 

...






..
Template SS confidence 



































   311. .......320.........330...... ...340.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions