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Job DescriptionP76043
Confidence100.00%DateThu Jan 5 12:17:44 GMT 2012
Rank15Aligned Residues328
% Identity14%Templatec1e3jA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nadp(h)-dependent ketose reductase; PDBTitle: ketose reductase (sorbitol dehydrogenase) from silverleaf2 whitefly
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70.....
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Query Sequence  MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASPF. . . . . IDEDFNGEWQMFTPRPADAPRGIE
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Template Sequence  LSAVLY. KQNDLRLEQRPIPEPKEDEVLLQMAYVGICG. SDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK
Template Known Secondary structure  .TT






TT
.SBSSS
B

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   6...10. ........20.........30.........40.. .......50.........60.........70.........80...
 
   76...80.........90.........100...... ...110.........120.........130.........140........
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Query Sequence  FGKFQLGNMVVGDIIECGSDVTDYAVGDSVC. . . . . . . GYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMS
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Template Sequence  KGDRVAVEPGVP. . . . CRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVH
Template Known Secondary structure  TT



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SSSTT
GGG
TT
TTBTTB

S
BSGGG

TTS
T
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   84.....90..... ....100.........110.........120.........130.........140.........150.........
 
   149150.........160.........170.........180.........190.........200.........210....... ..220....
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Query Sequence  GVRDANVRVGDFVVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKE. . . . IKTLTGK
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Template Sequence  . ACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIG
Template Known Secondary structure  .T

TT


STT
S
TT
S

TTTS
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   160.........170.........180.........190.........200.........210.........220.........230........
 
   225....230.........240.........250.........260.........270.........280.........290.........300....
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Query Sequence  QGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETC
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Template Sequence  DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVT. . VPLVNACAREIDIKSVFRY. . . . . . . . . . . . CNDYPIA
Template Known Secondary structure  S

S
S

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TT

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   239240.........250.........260.........270........ .280.........290....... ..300....
 
   305....310.........320.........330.........340.........350
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Query Sequence  WELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF
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Template Sequence  LEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKK. ADNTIKVMISC
Template Known Secondary structure  TTS


GGGGGG
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   305....310.........320.........330........ .340.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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