Job Description O32583 Confidence 20.05% Date Thu Jan 5 10:56:31 GMT 2012 Rank 142 Aligned Residues 60 % Identity 20% Template c3m63B_ PDB info PDB header:ligase/protein binding Chain: B: PDB Molecule:ubiquitin domain-containing protein dsk2; PDBTitle: crystal structure of ufd2 in complex with the ubiquitin-like (ubl)2 domain of dsk2 Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure															.	.													.	.	.	.																	.
Query SS confidence															.	.													.	.	.	.																	.
Query Sequence		M	Q	I	L	F	N	D	Q	A	M	Q	C	A	.	.	A	G	Q	T	V	H	E	L	L	E	Q	L	.	.	.	.	D	Q	R	Q	A	G	A	A	L	A	I	N	Q	Q	I	V	.	P	R	E	Q	W	A	Q	H	I	V	Q	D	G	D	Q	I	L	L	F
Query Conservation															.	.													.	.	.	.																	.
Alig confidence															.	.													.	.	.	.																	.
Template Conservation
Template Sequence		I	H	I	K	S	G	Q	D	K	W	E	V	N	V	A	P	E	S	T	V	L	Q	F	K	E	A	I	N	K	A	N	G	I	P	V	A	N	Q	R	L	I	Y	S	G	K	I	L	K	D	D	Q	T	V	E	S	Y	H	I	Q	D	G	H	S	V	H	L	V
Template Known Secondary structure							S	S					B				T	T	S	B													S			S	T	T						T	T					T	T	S	B	T	T	T	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions