Job Description O32583 Confidence 37.01% Date Thu Jan 5 10:56:31 GMT 2012 Rank 103 Aligned Residues 44 % Identity 20% Template c3jxoB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trka-n domain protein; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 1.55 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	T	V	H	E	L	L	E	Q	L	D	Q	R	Q	A	G	A	A	L	A	I	N	Q	Q	I	V	P	R	E	Q	W	A	Q	H	I	V	Q	D	G	D	Q	I	L	L	F	Q
Query Conservation
Alig confidence										.	.																					.	.
Template Conservation										.	.																					.	.
Template Sequence		V	G	K	K	L	K	D	L	.	.	P	L	P	R	D	S	I	I	A	A	I	V	R	G	G	V	L	V	V	P	.	.	R	G	D	T	E	I	L	S	G	D	K	L	Y	V	I	V
Template Known Secondary structure		T	T		B	G	G	G		.	.				T	T									T	T						.	.		T	T		B			T	T
Template Predicted Secondary structure										.	.																					.	.
Template SS confidence
		160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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