 |
Job Description | O32583 | Confidence | 70.93% | Date | Thu Jan 5 10:56:31 GMT 2012 |
Rank | 58 | Aligned Residues | 60 |
% Identity | 20% | Template | c2kd0A_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:lrr repeats and ubiquitin-like domain-containing |
PDBTitle: nmr solution structure of o64736 protein from arabidopsis2 thaliana. northeast structural genomics consortium mega3 target ar3445a
|
Resolution | UNK |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
|
. | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|  |  |  | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | I | L | F | N | D | Q | A | M | Q | C | A | . |
. |
A | G | Q | T | V | H | E | L | L | E | Q | L | . |
. |
. |
. |
D | Q | R | Q | A | G | A | A | L | A | I | N | Q | Q | I | V | P | R | E | Q | . |
W | A | Q | H | I | V | Q | D | G | D | Q | I | L | L | F |
Query Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |   | . | . |   |   |   |
|
|   |   |
|
|   |   |   | . | . | . | . |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |   | . |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |
|   |
|   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|
Template Sequence |   |
L | T | V | K | F | G | G | K | S | I | P | L | S | V | S | P | D | C | T | V | K | D | L | K | S | Q | L | Q | P | I | T | N | V | L | P | R | G | Q | K | L | I | F | K | G | K | V | L | V | E | T | S | T | L | K | Q | S | D | V | G | S | G | A | K | L | M | L | M |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |
|  |  |  |  | T | T |  |  |
|
| T | T |
| B | T | T | T | T | T |
|
| T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|