Job Description P42591 Confidence 7.95% Date Thu Jan 5 12:01:37 GMT 2012 Rank 29 Aligned Residues 141 % Identity 8% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	G	N	F	R	Y	S	V	T	A	T	P	A	G	H	H	D	E	S	K	A	W	L	H	F	G	K	Y	D	R	Y	D	D	K	Y	T	Y	P	A	M	M	N	G	Y	I	Q	Y	D	L	A	E	G	I	T	W	M	N	G	L	E	I	T	D	G	T	G	Q	L	Y	L	T	G	L	L	T	P	N	F
Query Conservation
Alig confidence														.	.																									.	.			.	.
Template Conservation														.	.																									.	.			.	.
Template Sequence		G	F	Y	V	Q	A	D	A	A	H	A	K	.	.	A	S	S	S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	L	.	.	R	F	.	.	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V
Template Known Secondary structure														.	.				S	S																	T	T		.	.			.	.										S	S			S	S																		S	S	S
Template Predicted Secondary structure														.	.																									.	.			.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
										256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																					.																												.
Query SS confidence		.	.	.	.	.	.	.	.																					.																												.
Query Sequence		.	.	.	.	.	.	.	.	A	A	R	A	W	H	H	T	G	R	A	D	G	L	D	V	P	G	S	E	.	S	G	M	M	V	S	A	M	Y	E	A	L	K	G	V	Y	L	S	T	A	Y	T	Y	A	K	H	R	.	P	D	H	A	D	D	E	T	T	S	F	M	Q	F	G	I	W	Y	E	Y
Query Conservation		.	.	.	.	.	.	.	.																					.																												.
Alig confidence		.	.	.	.	.	.	.	.																					.																												.
Template Conservation
Template Sequence		K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure																			T	T																							T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions