Job Description P42591 Confidence 8.91% Date Thu Jan 5 12:01:37 GMT 2012 Rank 27 Aligned Residues 173 % Identity 10% Template c3bryB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:tbux; PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux Resolution 3.20 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		Y	R	T	N	D	G	T	E	I	M	L	S	L	R	Q	D	S	S	L	D	D	L	Q	W	W	G	D	F	T	P	D	L	G	Y	V	I	P	N	T	R	D	I	M	T	A	L	K	V	Q	N	.	.	L	S	G	N	F	R	Y	S	V	T	A	T	P	A	G	H	H	D	E	S	K	A	W	L	H	F	G	K
Query Conservation																																																				.	.
Alig confidence																						.	.	.	.	.	.																									.	.																					.
Template Conservation																						.	.	.	.	.	.																																															.
Template Sequence		Y	Q	V	T	P	D	T	R	I	G	A	A	Y	Q	A	K	T	H	V	G	.	.	.	.	.	.	D	L	T	G	Q	A	T	L	S	A	V	G	N	I	P	L	K	G	D	V	T	V	R	N	F	Q	M	P	A	Q	L	T	V	G	I	S	H	Q	F	N	D	Q	L	S	V	S	.	A	D	Y	Q	R	V	F
Template Known Secondary structure						T	T											B	B			.	.	.	.	.	.									B																		B												S	S	S	S					.
Template Predicted Secondary structure																						.	.	.	.	.	.																																															.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	R	Y	D	D	K	Y	T	Y	P	A	M	M	N	G	Y	I	Q	Y	D	L	A	E	G	I	T	W	M	N	G	L	E	I	T	D	G	T	G	Q	L	Y	L	T	G	L	L	T	P	N	F	A	A	R	A	W	H	H	T	G	R	A	D	G	L	D	V	P	G	S	E	S	G	M	M	V	S	A	M	Y
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	S	S	V	M	K	D	M	N	V	G	F	V	Q	S	G	S	A	A	N	L	D	L	S	L	P	Q	N	Y	R	D	I	S	V	F	G	I	G	A	E	Y	R	Y	N	A	K	W	T	F	R	G	G	F	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	A	Q	E	T	T	S	L	T	G	G	V	S	Y
Template Known Secondary structure		G	G	G			S									S	S	S																												T	T										.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.													.	360	.	.	.	.	.	.	.	.	.	370	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	K	G	V	Y	L	S	T	A	Y	T	Y	A	K	H	R	P	D	H	A	D	D	E	T	T	S	F	M	Q	F	G	I	W	Y	E	Y
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		A	I	G	K	N	D	V	I	D	F	A	L	S	V	A	L	R	K	T	S	V	T	H	S	Q	.	.	.	.	V	N	A	V	I	A	Y	Q	K
Template Known Secondary structure			S	S	T	T													B								.	.	.	.
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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