Job Description P42591 Confidence 5.69% Date Thu Jan 5 12:01:37 GMT 2012 Rank 35 Aligned Residues 143 % Identity 13% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	G	N	F	R	Y	S	V	T	A	T	P	A	G	H	H	D	E	S	K	A	W	L	H	F	G	K	Y	D	R	Y	D	D	K	Y	T	Y	P	A	M	M	N	G	Y	I	Q	Y	D	L	A	E	G	I	T	W	M	N	G	L	E	I	T	D	G	T	G	Q	L	Y	L	T	G	L	L	T	P	N	F
Query Conservation
Alig confidence															.	.	.																.	.						.	.																								.
Template Conservation															.	.	.																.	.						.	.																								.
Template Sequence		T	W	Y	T	G	A	K	L	G	W	S	Q	Y	.	.	.	S	R	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	.	.	V	N	P	Y	V	.	.	G	F	E	M	G	Y	D	W	L	G	R	M	P	R	K	A	Q	G	V	Q	L	T	A	.	K	L	G	Y	P	K	L	G	T	D	D	L	D	I	Y	T
Template Known Secondary structure													T	T	.	.	.			S	S												.	.		S	S	S		.	.											S	S	S	S										.						T	T		T	T	T
Template Predicted Secondary structure															.	.	.																.	.						.	.																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.									.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		A	A	R	A	W	H	H	T	G	R	A	D	G	L	D	V	P	G	S	E	S	G	.	.	.	.	.	.	.	.	M	M	V	S	A	M	Y	E	A	L	K	G	V	Y	L	S	T	A	Y	T	Y	A	K	H	R	P	D	H	A	D	D	E	T	T	S	F	M	Q	F	G	I	W	Y	E	Y	G	G	G	R	F
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																											.	.
Template Conservation																																																										.	.
Template Sequence		R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	.	.	N	N	A	S	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	G	E	A
Template Known Secondary structure									S	S	B						S	S	S						B																S	S	S		S	S	S											.	.	S	S	S	S													S		S	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		328
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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