Return to main results Retrieve Phyre Job Id

Job DescriptionP42591
Confidence20.08%DateThu Jan 5 12:01:37 GMT 2012
Rank17Aligned Residues45
% Identity11%Templatec2f1tB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.... .....310.........320..
Predicted Secondary structure 









...........







Query SS confidence 


























. . . . . . . . . . .

















Query Sequence  MMVSAMYEALKGVYLSTAYTYAKHRPD. . . . . . . . . . . HADDETTSFMQFGIWYEY
Query Conservation    


 

 
    


 

    
 
...........  
  
 

 



 

 
Alig confidence 


























...........

















Template Conservation   



 
 
     
  

 
                      
      

 


Template Sequence  GQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF
Template Known Secondary structure 
SSS

SS






Template Predicted Secondary structure 













Template SS confidence 























































   136...140.........150.........160.........170.........180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions