 |
Job Description | P42591 | Confidence | 3.23% | Date | Thu Jan 5 12:01:37 GMT 2012 |
Rank | 61 | Aligned Residues | 41 |
% Identity | 27% | Template | c1qo6A_ |
PDB info |
PDB header:cell adhesion protein | Chain: A: PDB Molecule:fibronectin; |
PDBTitle: solution structure of a pair of modules from the2 gelatin-binding domain of fibronectin
|
Resolution | UNK |
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | I | M | T | A | L | K | V | Q | N | L | S | G | N | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | Y | S | V | T | A | T | P | A | G | H | H | D | E | S | K | A | W | L | H | F | G | K | Y | D | R |
Query Conservation |   |
  |
|   |   |
|
|
|
|
|
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|   |
|   |
|
|
|
|
|
| . |   |
|   |
|
Template Sequence |   |
S | V | G | M | Q | W | L | K | T | Q | G | N | K | Q | M | L | C | T | C | L | G | N | G | V | S | C | Q | E | T | A | V | T | Q | T | Y | G | G | N | S | N | G | E | P | C | V | L | P | F | . |
T | Y | N | G |
Template Known Secondary structure |   |
| T | T |
|
|  |  |  |  |
| S | S | S |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  | S |
|
|
|
|
|
| S | T | T | T | T | S |
|
|
|
|
| S |  | . |  |  | T | T |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
. | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|